Burkholderia semiarida: R0290_03670
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Entry
R0290_03670 CDS
T10421
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bser Burkholderia semiarida
Pathway
bser03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0290_03670 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bser03019
]
R0290_03670 (pcnB)
Enzymes [BR:
bser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
R0290_03670 (pcnB)
Messenger RNA biogenesis [BR:
bser03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
R0290_03670 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
XCV60874
LinkDB
All DBs
Position
1:complement(802982..804523)
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AA seq
513 aa
AA seq
DB search
MIKKFIRKLLGQDETEQTPPAAAPADEAAPAAPRAPKGARGGAKKPRSNHEPTVVPASVH
GINPALISKNAVRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDATPTEVQRLFR
RARLIGRRFQIVHVQFGQELIEVSTFRALVDAPPEAAAAAAEPPRRLKRDELDRRTHAVD
ASGRVLRDNVWGEQHEDAARRDFTINAMYYDPSTQTVLDYHDGMADVRARLLRMIGDPAT
RFREDPVRMLRVVRFAAKLDFEIEPHTREPIHALADLINNVPAARLFDEMLKLLLSGHAL
ACLKKLRKEGLHHGLLPLLDVVLEQPQGEKFITLALNNTDARVRAGKPVSPGFLFATLLW
HDMRQRFEQYTAEGEIPVPALHRAMDDVLDMQTEKLAIHKRYSADMREIWGLQLRLEKRS
GRSAMRLLEHQRFRAGYDFLLLRCESGELDAEVGQWWTDFIEGDAAAREALLTQGGSKEK
SPRKRRRRGGARNRKPGEGAAEQAPDTAGGSDD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaaaattcatccgcaagctgctcggccaggacgaaaccgagcaaacgcctccc
gccgcggccccggccgacgaagcggccccagccgccccgcgcgccccgaagggcgcccgc
ggcggcgcgaagaaaccgcgcagcaaccatgagccgaccgtcgtgccggccagcgtgcac
ggcatcaacccggcgctgatctcgaagaacgcggtgcgcgtgaccgacacgctgcagcag
gcgggctttcgcgcattcatcgtcggcggtgcggtgcgcgacctgctgctcggcatcgcg
ccgaaggacttcgacgtcgcgaccgacgcgacgccgaccgaggtgcagcgcctgttccgc
cgcgcgcgcctgatcggccgccgcttccagatcgtgcacgtgcagttcggccaggagctg
atcgaggtgtcgacgttccgcgcgctggtcgacgcgccgcccgaggcggccgcggctgcg
gccgagccgccgaggcgcctgaagcgcgacgaactcgatcgccgcacgcacgcggtcgac
gcgagcggccgcgtactgcgcgacaacgtgtggggcgagcagcacgaggacgccgcgcgc
cgcgacttcacgatcaacgcgatgtactacgacccgtcgacgcagacggtgctcgactac
cacgacgggatggccgacgtacgcgcccgcctgctgcggatgatcggcgatccggccacg
cgctttcgcgaggatccggtgcggatgctgcgcgtcgtgcgcttcgcggcgaagctcgat
ttcgagatcgagccgcatacgcgcgagccgatccacgcgctcgccgacctgatcaacaac
gtgccggccgcacgcctgttcgacgaaatgctgaagctgctgctgtcgggccatgcgctc
gcgtgcctgaagaagctgcgcaaggaaggcctgcatcacgggctgctgccgctgctcgac
gtcgtgctcgaacagccgcagggcgagaagttcatcacgctcgcgctgaacaacaccgac
gcgcgcgtgcgcgccggcaagccggtgtcgccgggcttcctgttcgcgacgctgctgtgg
cacgacatgcgccagcgcttcgagcaatacacggccgagggcgaaatcccggtgccggcg
ctgcatcgcgcgatggacgacgtgctcgacatgcagaccgagaaactcgcgatccacaag
cgctactcggccgacatgcgcgagatctggggcctgcaactgcgcctcgagaaacgctcg
ggccgcagcgcgatgcggctgctggaacaccaaaggtttagagcggggtatgatttcctc
ctgttacgctgcgaatccggcgagctcgatgcggaagtcggacagtggtggacggatttc
atcgaaggcgacgcggccgctcgcgaggcattgctcacgcagggcggctcgaaggaaaaa
tcgccccgcaagcggcgccgccgcggcggtgcgcgaaaccgcaagccgggtgaaggtgcc
gccgagcaggcgccggataccgcgggcgggtccgacgactga
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