Burkholderia semiarida: R0290_04170
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Entry
R0290_04170 CDS
T10421
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
bser Burkholderia semiarida
Pathway
bser00521
Streptomycin biosynthesis
bser00523
Polyketide sugar unit biosynthesis
bser00541
Biosynthesis of various nucleotide sugars
bser01100
Metabolic pathways
bser01110
Biosynthesis of secondary metabolites
bser01250
Biosynthesis of nucleotide sugars
Module
bser_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R0290_04170 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R0290_04170 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R0290_04170 (rfbC)
Enzymes [BR:
bser01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
R0290_04170 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
XCV60965
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All DBs
Position
1:905035..905586
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AA seq
183 aa
AA seq
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MAIQVTATALPEVKIIEPKVFGDARGHFYESFNARDFAEHVAAGVEFLQDNHSRSTKGVL
RGLHYQIRHAQGKLVRVVEGEVFDVAVDIRKHSPNFGKWVGVVLSAENHRQVWIPPGFAH
GFVVLSDVAQFLYKTTDYWYPEHERCIVWNDPEIGIEWPLDVAPLLAPKDAAGARLSEAE
VYV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcaagtaacggcaacggcgctgccggaagtcaagatcatcgaaccgaaggtc
ttcggcgatgcgcgtggccatttctatgaaagcttcaacgcgcgcgacttcgcggaacac
gtggcggcgggcgtcgaattccttcaggacaatcattcgcgctcgacaaagggggtgctg
cgcggcctccactaccagattcggcacgcgcagggaaaacttgtgcgcgtcgtggaaggc
gaggtattcgacgtcgcggtcgatatccgcaagcactcgccgaatttcggcaagtgggtc
ggcgtcgtgctgtcggccgagaaccatcggcaggtatggattccgcccggttttgcgcac
ggcttcgtcgtgctgtccgacgttgcgcagttcctgtacaagacgaccgattactggtac
ccggagcacgagcgctgtatcgtgtggaacgatcctgagatcgggatcgaatggccactc
gatgtggcgccattgctggcgcccaaggatgccgcgggcgcacgactcagcgaagccgag
gtgtacgtttga
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