Burkholderia semiarida: R0290_05260
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Entry
R0290_05260 CDS
T10421
Name
(GenBank) MATE family efflux transporter
KO
K26939
MATE family, multidrug efflux pump
Organism
bser Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bser02000
]
R0290_05260
Transporters [BR:
bser02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
R0290_05260
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
XCV61163
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Position
1:complement(1120554..1121942)
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AA seq
462 aa
AA seq
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MSHSGLTRTAAAPPSLSSHAADTARLAAPLAIAQLSQMAMSVTDTVLLGSLGPDSLAAGG
LGANFFFVIVTILQGVLSSVSVSVAHARGAQAEDRVPHIYWTGFALSVLLAIPAIVALSL
AEPILLMFHEPPLLAHHVGEYTGILRFAALGSLIGVGLMRAFLPAIGAARRLLWVSIGGV
GVNGVLNYGLIHGAFGLPRLGFLGSAVATTITIWLTALALIWLLHGRQRFRHFVTAARPK
LPVMGELIGIGWPVAITYGVESTLFLATGLTVGVLGATSLAAHQIALNVASVSFMVPLAI
GQAANVRVGYWVGAGSPVAARHAGFVALALGVGFMSLSGLVMIVAPHTIVGLYLHLDDPA
NAATVSLAASLLGIAAVFQIVDGMQTVASGALRGLKDTRIPMLAATFGYWGIGFPTGYWF
AFHAGLGARGLWWGLAAGLASVAALMAWRFHRKTTSLIAAAR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattccggtctcacgcggacggccgccgcgccgccgtccttgtccagtcatgcc
gccgataccgcgcgcctcgccgcgccgctcgcgatcgcgcaactttcccagatggcgatg
agcgtcaccgacacggtgctgctcggttcgctcggccccgattcgctcgcggcgggcggg
ctcggcgcgaacttcttcttcgtgatcgtgacaatcctgcaaggcgtgctgtcgtcggtc
agcgtgagcgtcgcgcatgcgcgcggcgcgcaagccgaggaccgcgtgccgcacatctac
tggaccggcttcgcgctgtccgtgctgctcgcgattccggccatcgtcgcgctgtcgctc
gccgaaccgatcctgctgatgttccacgagccgccgctgctcgcgcatcacgtcggcgaa
tacacgggcatcctgcgcttcgcggcgctcggcagcctgatcggcgtcgggctgatgcgc
gcgttcctgccggcgatcggcgccgcgcggcggctgctgtgggtgtcgatcggcggcgtc
ggcgtcaacggcgtgctgaactacgggctgatccacggcgcattcgggctgccgcgcctg
ggctttctcggctcggccgtcgcgacgacgatcacgatctggctcaccgcgctcgcgctg
atctggctgctgcacggccggcagcgctttcgccatttcgtgaccgccgcgcgcccgaag
ctgcccgtgatgggcgagctgatcggcatcggctggccggtcgcgatcacgtatggcgtc
gaatcgacgctctttctcgccaccggcctcacggtcggcgtgctgggcgcgacgtcgctc
gccgcgcaccagatcgcgctgaacgtcgcgtcggtgtcgttcatggtgccgctcgcgatc
ggccaggcggcgaacgtgcgcgtcggctactgggtcggcgcgggctcgcccgtcgccgcg
cggcacgcgggcttcgtcgcgctcgcgctcggcgtcggcttcatgtcgctgtcgggcctc
gtgatgatcgtcgcgccgcatacgatcgtcggcctgtacctgcacctcgacgatccggcc
aacgcggcgacggtatcgctcgccgcgtcgctgctcggcatcgccgcggtgttccagatc
gtcgacgggatgcagaccgtcgcgtcgggtgcgctgcgcggcctgaaggacacgcgcatc
ccgatgctcgccgcgaccttcggttactggggcatcggcttcccgaccggctactggttc
gcgttccacgccggcctgggcgcgcgcggcctgtggtgggggctcgcggccggcctcgcg
agcgtcgccgcgctgatggcctggcgctttcaccgcaagaccacgtcgctcatcgcggcg
gcgcgctag
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