Burkholderia semiarida: R0290_05925
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Entry
R0290_05925 CDS
T10421
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bser Burkholderia semiarida
Pathway
bser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R0290_05925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bser03400
]
R0290_05925
Enzymes [BR:
bser01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
R0290_05925
DNA repair and recombination proteins [BR:
bser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R0290_05925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
RecD_N
DEAD
AAA_22
AAA_25
MukB
ATPase
CbiA
Motif
Other DBs
NCBI-ProteinID:
XCV61283
LinkDB
All DBs
Position
1:1261855..1264161
Genome browser
AA seq
768 aa
AA seq
DB search
MTASDDMLEFTGGLVARLPEPADFGIALAEGFARRIGDLARRAGAPPASARWAARAAFAT
SRATAGGHVCVALGALAQRYEAPLDEVRAALAASGVVAFGTLARGDERPLIVDRLDHLYL
SRYFDYERRLADALVAQAGVAAPDERLSPDRLRDSLARYFGPATGEVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRIALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGAGGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPAFTAAARTRIAQALGIDEAAFVAALPVPDEAA
PAAVPAAHPVSASARASASPSASVPVSRKPAARPKVDARQASLFDDEPQDDEASSPGIAP
PPRAESAPADAGVPGGTAPAWIEADELAWLDTVELPPFDTADAALASVTAAASPLTGEAA
AASAGTSAPAPLADCVVWLERNYRFGLDSPIGRLSLAIRRGDVQAALDALPADDSAAASF
HDDAGDTLASSTVERLARRFGAYLDALRDALAAPVPDPLPMFDALNRFRILCATRGGSRG
AEHVNALVAAHVRHAARVPLAVGAHWFTGRPIMVTRNDYALGLFNGDIGIALPDAQGVLR
VWFRRADGTVRAVSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGRVLTRELVYTA
VTRARTRVQVIGPRRVLAQAVATRTQRDSGLAARIDEALARCRMEVSR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtccgacgacatgctcgaattcaccggcggcctcgtcgcgcggctgcccgag
ccggccgatttcggcatcgcgctcgcggaaggcttcgcgcgccgcatcggcgacctcgcg
cggcgtgccggtgcgccgcccgcatcggcacgctgggcggcgcgcgccgcgttcgcgacg
agccgcgcgaccgccggcggccacgtgtgcgtcgcgcttggcgcgctcgcgcagcgctac
gaagcgccgctcgacgaggtccgtgcggcgctggccgcaagcggcgtggtcgcgttcggc
acgctcgcgcgcggcgacgagcggccgctgatcgtcgaccggctcgatcacctgtacctg
tcgcgctatttcgattacgaacggcggctcgccgatgcgctcgtcgcgcaggccggcgtc
gccgcgccggacgaacgcctgtcgcccgaccggttgcgcgacagtctcgcccgttacttc
gggccggccaccggcgaagtcgactggcagcgcgtcgcggcgatcgtcgcgctgacgggc
cgcgtgacgatcgtcagcggcgggccgggcacgggcaagacgacgaccgtcgtcggcgtg
ctcgcctgtctgctcgacgcgcacccggggctgcgcatcgcgctggccgcaccgaccggc
aaggccgcacagcggatgcaggaggcgctgcacgcgcgcgccggcgatctgccgccggaa
ctcgccgcgcgcctgcccgacacgtcgtacacactgcatcggttgctgggcggcggtgga
gcaggcggtttccggcatcatcgcgacaatccgttgccgtacgatctgatcgtcgtcgac
gaggcgtcgatgatcgacgtcgcgctcgccgcgcatctgctcgacgcgctcgcgccgggc
gcgcggctcgtgttgctgggcgacaaggatcaactggccgcggtcgaggccggcgccgta
ttcgcggagctgagcgcgcggccggcgttcacggccgcggcgcgcacgcgcatcgcgcag
gcgctgggcatcgacgaggcggcgttcgtcgcggcgttgccggtgccggacgaagccgca
ccggctgcggttccggccgcgcatccggtttccgcttccgcacgggcttcggcgtcgcca
tcggcgtccgtacccgtttcacgcaagccggcggcccggccgaaagtcgatgcgcgacag
gcgtcgctcttcgacgacgaaccgcaggacgacgaagcgtcgtcgcccggcatcgcgccg
ccaccgcgcgcggagtcggcaccggccgatgccggcgtaccgggcggcactgcgcccgcc
tggatcgaggccgacgaactcgcgtggctcgacaccgtcgagctgccgccgttcgacacg
gccgatgcggcgctcgcgtcggtgacggccgccgcatcgccattgaccggcgaagccgcc
gccgcgtccgccggcacgtccgctccggcaccgctcgcggattgcgtcgtgtggctcgaa
cgcaattaccggttcggtctcgattcgccgatcgggcggctgtcgctcgcgatccgccgc
ggcgacgtgcaggcggcgctcgatgcgctgcctgccgacgactcggccgccgcgtcgttt
catgacgatgcgggcgacacgctggcgtcgtcgacggtcgagcggctcgcgcggcgcttc
ggcgcctatctcgacgcattgcgcgacgcgttggccgcgccggtgcccgatccgctgccg
atgttcgacgcgctcaaccggttccggattctgtgcgcgacccgcggcggctcgcgcggc
gcggaacacgtcaatgcgctggtggccgcgcacgtgcggcacgcggcgcgcgtgccgctc
gcggtcggcgcgcactggttcaccgggcggccgatcatggttacgcgcaacgactatgcg
ctggggctattcaacggcgacatcggcattgcgctgcccgacgcgcaaggcgtgctgcgc
gtgtggttccggcgcgcggacggcaccgtgcgcgcggtgtcgccggccgcgctgccgccg
cacgagacggcgttcgcactgacggtgcacaaatcgcagggctcggagttcgacgaggcg
gcgctcgtgctgcccgcgtcgttcggccgcgtgcttacgcgcgagctcgtttatacggcc
gtcacgcgcgcccgcacgcgcgtgcaggtgatcgggccgcggcgcgtgctggcgcaggca
gtcgcgacgcgcacgcagcgcgattcggggctcgcggcccgcatcgacgaggcgctcgcc
cggtgccgcatggaggtttcgcgatga
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