Burkholderia semiarida: R0290_08010
Help
Entry
R0290_08010 CDS
T10421
Name
(GenBank) hemagglutinin repeat-containing protein
KO
K15125
filamentous hemagglutinin
Organism
bser Burkholderia semiarida
Brite
Glycosaminoglycan binding proteins [BR:
bser00536
]
Heparan sulfate / Heparin
Microbial pathogens
R0290_08010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCV61672
LinkDB
All DBs
Position
1:1722424..1731732
Genome browser
AA seq
3102 aa
AA seq
DB search
MNKNHYRLVFSRVRGMLVAVEETANASSNAGRGEIGFAIRSPHTYARCALRQVALAALVA
VGVVPIWANAQVVAGGTHAPSVIQTQNGLQQVNINRPGSSGVSMNTYNQFDVPKPGIILN
NSPINVQTQLGGVIGGNPNYRAGDAARLIVNQINSNNPSFIRGKVEIGGAAAQLVIANQA
GLVVDGGGFLNTSRATLTTGNPNFGPDGSLTGFNVNQGLITVTGAGLDTANVDQVDLLAR
AVQINAKAYAKTLNVVAGSNQVDYTTLNATPIAGNGAAPSIAIDVSQLGGMYANRVFLVS
SERGVGVANAGDIAAQAGDLTLLANGRLVLSGQTNAAGNMSLSAAGGIQNSGVTYGKQSV
KVDTGADLTNSGAFTAQQNLTANVGSLNSTGTLGAGINADSTVGSSGDLSVTSSGQLTAT
GTNSAAGNATFAGSGVDLSNSATAANGNLTLTATAGDVNLTGSTASAKGAVNAQASGTVI
NDRGNLSSGAGMTLGGGNLSNQGGRAYSQGPLSVQMAGTVSNQNGMLSSQSTADVRGSAI
QNNAGLIQSAGRQTIAGASIDNSAGRLISLNADGLSVTATGALTNAAGANVSGDPGGVIG
GKGDVTVQGNTVTNSGSVSADANLHVIGQSVDNGNGILHAGQTATVAAGTHFANANGRVE
GQSAVLNGTTLDNSQGTINAETVSLNGSTLLNHGGTVTQTGAGPMTVAITDTLDNSNNGL
IQTRGTDLSLTPATLINDNGGTITHVGTGTLTVGNASGTVNNQAGAIASNGRTVLQGKTI
DNSAGSASGQTGLSVNAADSITNTSGKLTSNANVDVNAGGALFNDGGELGSKTATTTIHG
ASLSNLGGKIASPVLAATVAGLIDNSQNGDIEANRLALTAANLKNEGGRISQWQNGPTTL
AISGTLDNSNGGVIQTNSADLTLAPAVLDNSKGTLVHGGAGTLMLTPGNGAGALNNSGGT
IGTNGQAILKAGSLDNGSGVIAAKLGLSAMIAGAMNNAQGLMRSNAYLSMISGGALSNRQ
GHIEAGQAGDASTLSIQAASIDNTDGAVHDFGSGAMNVRGGSQIVNSHAGGVAGMGQMTG
QGDVTIGAASISNTQGGQLMGANLLVQGDTLDNTGGQIGNVANAAGDVNVNTTGAISNTG
GSIGSTRDLTVAASTLFGGGTYSAAHDATINLQGDFTTTPQTQFNIGHDLTFTLPGTFTN
NANLQSVNNLTLNAGNIVNTGAITAGSLLRTHSGDLTNYGAMVGGSVAIQASGTVSNLGP
VALIGASDTSGLLEILAHDIENRDDTTLGDSMPTTTIFGLGKVALAGGKDANGNYTNAAL
INNSSAAIQSGSSMELHADKVTNTRRVMQTSGNTSQVDPALLQQLGISMSGCAAYFMAAC
SGQDVHWVNIFHDPNDPSYDPAPIIAALKLQPGGVFTVPPDGGQWNSGYQYTTYEGKATA
NTVTKLSPGAQIASGGDLDASTVKTFQNYWSSVTAAGDIKQPVSLDMDGWGATSQQAPGV
TVTYSGYYHYNNYDNTEHNWTLPFGDKPFVGGPGGYTQAAPADVRQYSLPDYRSTWGANG
TISGNGVSVNNTAANATIPSLGLLPGQAVPGLTIGTVSGNASGTQSGAAAIKGGTPTWVD
PVIASATAVSVLNNLTIPQGGLYRPNPAPNPTYLIETNPAFTRMNNFLSSDYYLQQIGVN
PLTTEKRLGDGFYEQQLVRNQVTQLTGKAVLGPYTDLQGMYQSLMAAGAELSKSLNLPLG
MSLSAQQVAALTSNVIIMQTETVGGQQVLVPVVYLAKADQQNANGPLITAGNIDLKNTQV
FTNSGTVKADTTLALQGKQIDNAFGALQSGGLMSLDTTGNVDLTSANVKAGSLELNAGNK
LILDTATQTTHQVSRDGATSDKTTLGPAANLNVAGDAAIKTGGDFQQNAGNLNVGGNLNA
NIGGNWNLGAQQTGEHKVVQRANGVSDTDLNSATGSTVNVGGKSAIGVGGDLTAQGAQLN
FGQGGTVAAKGNVTFGAASTTSTINANSSGDQGNRSYAETRHGADQALTGTTVKGGDTLN
VVSGKDINVIGSTIDLNKGDANLLAAGDVNVGAATETHVYNSHETHSRSGVVSGTKIASS
QDATSTVANGSLISADGVSIGSGKDINVQGSTVVGTHDVTLNAAHDVNITTSQDTSQSST
TYQEQHSGLMSGGGLSFSVGNSKLAQQNQSSSVTNNASTVGSVDGNLSVNAGNTLHVQGS
DLVAGKDVTGKAANIVVDSATDTTHQAQQQQTSKSGLTIGLSGSVGDAINNAISETQAAR
ESAKDSNGRASALHSIAAAGDVAFGGMGGAALLNGAKGPQAPSIGVQVSVGSSHSSMQSS
EDQTIQRGSSINAGGNAKLIATGNGTPKDGNITIAGSNVNAANVALVANNQVNLVNTTDT
DKTRSSNSSSGSSVGVSIGTNGIGVSASMQRAHGDGNSDAAIQNNTHVNASQTATIVSGG
DTNVIGANVNANKVVADVGGNLNVASVQDTTVSAAHQSSAGGGFTISQTGGGASFSAQNG
HADGNYAGVNEQAGIQAGAGGFDVAVKGNTDLKGAYIASTADASKNNLTTGTLTTSDIEN
HSHYSANSAGFSAGASVGSSNKAVGPSSVSGSGGVTPMVFQNDSGDQSATTKSAVSAGTI
NITKPGEQTQDVANLNRDTTNLNGTVSKTPDVQKTLSQQADTMNAAQAAGQTVSQGIGLY
ADNKRDAALDAADKAYKAGDLAGAQAALNEAKGWMEGGASRAELQMGGGALIGGLGGGNA
LTAIGGAAGAGMSSLLANQAEKISKSVGDRTGSSLVGNIAANVAATVGGTLVGGTAGGAM
ASNVQLYNADNDQNKQTSNDVFASLSKKVAQAIVMTSDAKAGMWNGMVNVAGAIVNLPNG
GPLATPGDAGYVSLEGLKKPYKSGTSVGPDTEFWTPVLATLGLGGKAAVGTDAATTSADV
ATVGNGALKTASGDLSAAGNAARTQPYGNGASASPSPGTATAGSSGANAQLPTANGGVAA
AGTSSATNVGKVVIDGKIGGQLEARGWTQQEVHAVVNEGPVGTTMDNRSAGKTPDGLPRK
DSASVYGSKSGYVVVNDRTGEVVQVSGKNDPGWIPDSRIKWK
NT seq
9309 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaccattatcggctggtattcagccgcgtgcggggtatgttggttgcggtg
gaagaaaccgcaaatgcatcgagtaacgcagggcgaggcgaaatcggtttcgccattcgt
tcgccgcacacatacgcgagatgcgcgcttcgtcaggtggcactcgctgcactggttgct
gtcggcgtggtgccgatatgggccaatgcccaggttgttgcgggcggtacgcatgcgccc
tcggtaatccagacacagaacggacttcaacaggtgaacatcaaccgtcccggctcgtcg
ggcgtgtcgatgaacacgtacaaccagttcgacgtacccaagcccgggattattctcaat
aactccccgatcaacgtccagactcaactgggcggcgttatcggcggcaatcctaattac
cgcgctggcgacgccgcgcgtctgatcgtcaaccagatcaacagcaacaacccgagcttt
attcgcggcaaggtcgagattggaggcgcagccgcgcagctcgtgatcgcgaatcaggcc
ggcttggtcgtcgatggaggcggcttcctgaatacgagccgagccacgctgacaacaggc
aatccgaacttcgggccggacggttcgctcacgggcttcaacgtgaaccagggtctgatt
accgtgaccggcgcgggtctcgataccgccaatgtcgatcaggtggatttgttggcgcgc
gccgtgcagatcaacgcgaaggcctacgcgaagacgctgaatgtcgtcgccggatcgaat
caggtcgactacaccaccctgaacgccacgccgatcgccggcaacggcgcagcgcccagc
atcgcgatcgatgtcagccagctcggtggaatgtacgccaatagggtgtttttggtgtct
tcagagaggggcgtcggtgttgccaatgcgggcgacatcgccgcgcaagcgggggatctg
acgctgctcgcgaacggtcgtctcgtgctgtcgggccagaccaatgcggccggcaatatg
tcgctgtcggccgcgggtggtatccagaacagtggggtcacctacggcaaacagtcggtc
aaggtcgacacgggcgcggacctgactaacagtggcgcgttcacggcccagcagaatttg
accgccaacgtcggcagcctcaactcgacgggcacccttggcgctggcatcaatgccgac
agcacggtcggttcgagcggcgatctgagtgtcacgagcagcggtcagttgaccgcgacg
gggactaacagcgcggccgggaacgcgaccttcgccggtagcggtgtcgatctgtcgaac
agtgcgacggctgccaacggcaacctcacgctgaccgcgacggcgggcgacgtgaatttg
accggctcgaccgccagcgccaagggcgctgtgaacgcgcaggcgagcggcacggtcatc
aatgaccgtggcaatctatccagcggcgcgggcatgacgctcggcggcggcaacctgtcg
aatcagggcggccgcgcctattcgcaaggcccgctgtccgtgcagatggccggcaccgtg
tcgaaccaaaacggcatgctgagttcgcaaagcacggccgacgttcgcgggagtgcgatt
cagaacaatgccgggctgattcagagcgcgggcaggcaaacgattgcgggcgcatcgatc
gacaatagcgccggtcggctgatttccctgaacgcggacggcctgtcggtgacggcaacg
ggcgcactcacgaacgcggccggcgcgaacgtgagcggcgatccgggcggcgtcatcggc
ggcaagggcgacgtgaccgtacaggggaacacggtcacgaacagcggctcggtgtcggcc
gatgcgaacctgcacgtgatcggccagagcgtcgacaacggcaacggtatcctgcacgcc
gggcagactgcgacagtcgcagccggcactcattttgcgaatgcgaacggccgggttgag
ggccaaagcgccgtgttgaacggcacgacgctggacaactcccaaggcacgatcaatgcg
gagacagtctcgctgaacggttcgacgctgctgaaccacggcggcacggtcacgcagacc
ggcgctggcccgatgacggtcgcgattaccgacacgctggacaattcgaacaacggtctg
attcagacgcgcggcacggatctgtcgctcacgcctgctacgctgatcaacgacaacggc
ggcacgatcacgcacgtcggcacgggtacgctgacggtcggcaacgcttcaggcacggtc
aacaaccaagcgggcgccatcgccagcaacggccgcacggtcttgcagggcaagacgatc
gacaactcggccggttcagcgtccggccaaacgggcctgagcgtcaatgcggccgactcg
atcacgaatacgagcggcaagctcacgtcgaacgccaacgtagacgtaaacgccggcggc
gcactgttcaacgacggcggcgaactcggttcgaagacggcgaccacgacaattcatggt
gcgtcgctgtcgaacctcggcggcaaaatcgcgtcgcccgtgctggcggcaaccgtcgcc
ggcctgattgacaacagtcagaacggcgacatcgaagccaatcggcttgcattgacagcc
gcgaacctgaaaaacgagggcggccgcatctcgcaatggcagaacgggccgaccacgctc
gccatttccggcacgcttgataattcgaatggcggtgtcatccagaccaacagtgcggat
ctgacgctcgcaccagccgttctcgacaactcgaaaggcaccctcgtgcacggcggcgcc
ggcacgctgatgctcacgccgggtaacggcgcgggggccttgaacaacagtggcggcacg
atcggcaccaacggacaagccatcttgaaggccggcagtctggacaatggtagcggcgtc
atcgctgcgaagctgggtctgtctgcgatgattgccggagcaatgaacaacgctcagggc
ttgatgcgctccaacgcgtacctgtcgatgatcagcggcggcgcgttgtcgaaccggcaa
gggcacatcgaggcgggccaagcgggtgacgccagcacgctgtcgattcaggccgcgtcg
atcgacaacaccgacggtgcggtgcacgacttcggtagcggcgcgatgaacgtgcggggc
ggcagccagatcgtgaacagccacgcgggcggcgtcgccggcatggggcagatgacaggg
caaggcgatgtgacgatcggcgcggcctcgatctcgaacacgcagggcggccagctgatg
ggcgcgaacctgctggttcaaggcgatacgctggacaacaccggaggccagatcggcaat
gttgcgaatgcagcgggcgacgtgaacgtaaacacgacaggcgcgatctcgaacaccggt
ggttcgatcggctcgacacgcgacctgacggtggcggcttcgacgttgttcggcggtggc
acatacagcgcggcgcacgacgcgacgatcaacctgcaaggcgatttcacgaccacaccg
caaacgcagttcaacatcggtcacgacctgaccttcacgttgccgggcacgttcacgaac
aacgcgaacctgcaatcggtcaacaatctgacgctcaacgccggcaacatcgtcaacacg
ggcgcgatcacggccggtagcttgctcaggacgcattcgggcgacctgacgaactatggc
gcgatggtgggcggcagcgtcgccatccaggctagcggtaccgtgtcgaacctcggccct
gtcgcgttgatcggcgcatcggacacgtcgggcctgctggaaatcctcgcacacgacatc
gagaaccgcgacgacacgacgctgggcgattcgatgccgaccacgacgatcttcgggctc
ggcaaagtggctttggcgggcggcaaggacgcgaacggcaactacacgaacgcggcgttg
atcaacaattcgtcggcagcgatccagtcgggtagctcgatggaactgcacgccgacaag
gttacgaacacgcggcgcgtgatgcagacctcgggcaacacgagtcaggtcgatcccgcg
ctgctgcaacagctcggcatcagcatgtcagggtgcgctgcttacttcatggcagcctgt
agcggtcaggacgttcactgggtcaacatctttcacgaccccaacgatcccagctacgat
cccgcgccgatcatcgccgcgctcaaattgcagccgggtggtgtgttcaccgttccgccg
gacggcggccagtggaacagcgggtatcagtacacgacctacgagggcaaggcgaccgcc
aacaccgtgacgaagctgagcccgggcgcgcagatcgcgtcgggcggtgatctcgacgcg
tcgacggtcaagacgttccagaactactggagcagcgtgacggcggccggcgacatcaag
cagcccgtgagtctcgacatggacggctggggcgcaacgagccagcaagcgccgggcgtg
acggtcacgtattccgggtactaccactacaacaactacgacaacaccgaacacaactgg
accttgccgttcggcgacaagccgttcgtcggcggcccgggtggatacacgcaggcggcg
ccggccgacgtgcggcaatacagcttgcccgactatcgctcgacgtggggcgcgaacggc
acgatctcgggcaatggcgtgagcgtgaacaacacggcggccaatgcgaccattccgtcg
ctcggcctgctgcccggtcaggccgtgccgggactgacgatcggcacggtgagcggtaac
gcgagcggcacgcagtccggagccgccgcgatcaagggtggtacgcccacctgggtcgat
ccggtgatcgcaagcgcgaccgccgtgagcgtgttgaacaacctgacgattccgcagggc
ggcctgtaccggcccaatccggctccgaatccgacgtacctgatcgagacgaaccccgcg
ttcacgcggatgaacaatttcctgtcgagcgactattaccttcagcagatcggcgtgaat
ccgctgacgaccgaaaagcggctcggagacgggttctacgagcagcagctcgtgcgcaac
caggtcacgcaactgacgggcaaggcggtattggggccgtatacggaccttcagggcatg
tatcagtcgctgatggccgcgggcgctgaattgtcgaagtcgctgaacttgccgctcggc
atgagcctgtcggcgcagcaggtggccgcgctcacgagcaacgtgatcatcatgcagacc
gagacggtcggcggtcaacaagtgctcgtgccggtcgtgtatctggcgaaggccgatcag
caaaatgcgaacggtccgctgatcacggccggcaatatcgatttgaagaacacacaggtc
ttcacgaacagcggcaccgtgaaggcggatacgacgctcgcgcttcagggcaagcagatc
gacaacgcattcggtgcgctgcaaagcggcgggctgatgtcgctcgatacgacaggcaac
gtggatctcacgtcggccaacgtgaaggccggcagcctcgaactgaacgcaggcaacaag
ctgattctggataccgcgacgcagacgacgcaccaggtcagtcgcgacggcgcgacgagc
gacaagacgacgctcgggccggccgcgaacctgaacgtggccggcgacgcggcgatcaag
accggcggcgacttccagcagaacgccgggaacctgaatgtcggcgggaacctgaacgcc
aatattggcgggaactggaacctcggcgcgcagcagaccggcgagcacaaggtcgtgcag
cgcgcgaacggcgtgtcggatacggacctcaacagcgcgaccggcagcaccgtgaacgtc
ggtggcaagtcggccatcggtgtgggcggcgacctgacggcgcagggtgcgcaactcaac
ttcggtcagggcggcacggtcgcggccaagggcaacgtgacctttggcgcggcgagcacc
acgtcgaccatcaacgccaacagttcgggcgaccaaggcaatcgcagctatgcggaaacc
cggcatggggcggaccaggcgctgacgggcacgaccgtcaagggcggcgatacgctcaac
gtggtgtcgggcaaggacatcaatgtcatcggcagcacgatcgacctgaacaagggcgat
gcgaacttgctggcggccggcgatgtgaatgtcggggccgcgaccgaaacgcatgtgtac
aactcgcacgagacgcatagccgtagcggcgtcgtgagcggcacgaaaatcgccagcagc
caggacgcgaccagcactgtcgcgaacggcagcctgatttcggcggacggtgtgtcaatt
ggtagcggcaaggacatcaacgttcagggtagtacggtcgtcggtacacacgacgtgacg
ctgaacgcggcgcacgacgtgaacatcacgacgtcgcaggacaccagccaatcatcaacc
acctatcaggagcagcactcgggcctgatgtcgggcggcggcctgtcgttctcggtcggc
aacagcaagcttgcgcagcagaatcaatcgtcgagcgtgacgaacaacgccagtacggtc
ggctcggtcgacggcaatctgtccgtcaacgcgggcaatacgctgcatgtgcaaggcagc
gatctggttgcaggcaaggacgtgaccgggaaggcggcgaacatcgtcgtcgattcggcc
accgacaccacgcatcaggcgcaacagcagcagacgagcaagagcgggttgacgatcggc
ctgtcgggctcggtaggcgatgcgatcaacaacgcgatcagcgagacgcaggccgcgcgc
gaatcggcgaaggacagcaacggccgcgcatcggcattgcatagcatcgcggcggccgga
gacgtggcattcggcggcatgggcggcgcagcgctgttgaacggcgcaaaggggccacag
gccccgagcatcggcgtgcaggtcagcgtcggttcgagccatagctcgatgcagtcgtcc
gaagaccagacgattcagcgcggctccagcattaacgcgggcggcaatgcgaagctgatc
gcgacgggcaacggtacgccgaaggacggcaacatcacgatcgcgggctcgaacgtgaac
gccgccaacgtagcgttggtcgcgaacaaccaggtcaatctcgtcaacacgaccgatacg
gacaagacacggagttcgaactcgtcgtcggggtcgagcgtcggcgtatcgatcggcacg
aacggcatcggcgtgtccgcgtcgatgcagcgtgcgcatggcgacggcaattcggacgcg
gcgatccagaacaacacgcatgtcaacgcgagccagaccgcaaccatcgtgagcggcggc
gacacgaacgtgatcggcgcgaacgtgaacgcgaacaaggttgtggctgacgtgggcggc
aatctgaatgtggcgagcgttcaggacacgaccgtgagcgccgcacatcaatcgagcgcg
ggcggcggcttcacgatcagccagaccggcggcggagcgagtttcagtgcgcagaatggc
catgcagacggcaactatgcgggcgtgaacgagcaggcgggcatccaggccggtgctggc
gggttcgacgtggccgtgaagggcaataccgacctgaagggcgcgtatatcgccagcacg
gccgacgcgtcgaagaacaacctgacgactggcacgctcacgacgagcgacatcgagaac
cactcgcactacagcgcgaacagcgcgggcttcagcgcgggcgcgtcggtcgggtcgagc
aacaaggcagtcggcccgtcgtcggtatcgggctcgggcggcgtcacgccgatggtgttc
cagaacgacagcggcgaccagagcgcgacgacgaagagcgcggtgagcgctggcacgatc
aacatcacgaagccgggtgagcagacgcaggatgtcgcgaacctgaaccgcgacacgacg
aatctgaacgggacggtttcgaagacgcccgacgttcagaaaacgctgtcgcagcaggcc
gatacgatgaatgcggcgcaggcggccgggcagacggtgtcgcaggggattgggctgtat
gcggacaacaagcgcgacgcagcattggacgcagccgacaaagcctataaggctggcgat
ttggcgggcgcgcaggcggcgttgaacgaggccaagggctggatggaaggcggtgcgtcc
cgcgcggaattgcagatgggcggcggtgcgctgattggcggactcggcggcggcaatgcg
ctcacggcaattggtggggcagccggagcgggcatgtcgtcactgctggcgaaccaggct
gagaagatcagtaaatcggtcggcgataggaccggctcgtcgctggtcggcaatattgct
gcgaacgtggcggcgacggtgggcggaacgttagtgggcggcacggccggcggtgcaatg
gcgtcgaatgtgcagctttacaatgcagataacgatcagaacaagcaaacgtcaaacgac
gtatttgcgtcgttgtcaaagaaggtagcccaggctatcgtcatgacgtccgacgccaag
gccggtatgtggaacgggatggtcaacgtcgcgggcgcgatcgtcaaccttccgaacggc
gggccgcttgccacacctggcgatgcaggctatgtctcgctggaagggctgaagaagccg
tacaagtcaggaacgtcggtcggacctgacacggagttctggacaccggtcttggcgacg
ctgggtctgggcggcaaagctgcagtcggaaccgatgcggcaacaacgtcggcggatgtc
gccacggttggaaacggcgcactgaaaaccgcaagtggtgatttgagcgcggccggtaat
gcggcaagaacccaaccgtatggcaatggcgcaagcgcgtcgccctcgccgggaacagcg
acagcggggagttcaggagcgaatgctcaactcccaacggccaatggtggagttgcggcg
gcgggtacatcatcggccacaaacgtgggcaaggttgttatcgacggcaagatcggcggc
caacttgaggctcgtggatggacgcagcaagaagtgcacgcagtcgtcaatgagggacct
gtcggaacgacgatggataatcgatctgcggggaagaccccagacgggttgccgagaaaa
gattccgcatccgtgtacggttctaagagtggttacgttgtggtcaacgaccggaccggc
gaagttgtccaagtgagcggtaaaaacgatcctggttggattcccgacagtcgaattaaa
tggaagtga
DBGET
integrated database retrieval system
