Burkholderia semiarida: R0290_08975
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Entry
R0290_08975 CDS
T10421
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bser Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bser03009
]
R0290_08975 (rimO)
Enzymes [BR:
bser01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
R0290_08975 (rimO)
Ribosome biogenesis [BR:
bser03009
]
Prokaryotic type
ribosomal protein modification factors
R0290_08975 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XCV58803
LinkDB
All DBs
Position
1:complement(1950744..1952105)
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AA seq
453 aa
AA seq
DB search
MSQSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGSYDGADLVVVNTCGFIDEAVQES
LDAIGEALTENGKVIVTGCLGAKSSASGSNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLP
KPHDPFVDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAE
NLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVAALGELAAQYGAWVRL
HYVYPYPSVDEVIPLMAEGPFKGHVLPYLDVPFQHAHPDVLKRMKRPANAEKVLERVQKW
REICPDLTIRSTFIAGFPGETEAQFETLLDFIREAELDRVGCFAYSPVEGATANDLDGAL
PDEVREERRARFMEVAEEVSANRMQRKVGKTLKVLIDEVSAEGGIGRTAADAPEIDGVVY
VEPAAKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtcccccaaagtaggttttgtcagcctcggctgcccgaaagcgctcgtcgat
tccgaacagatcatcacgcaactgcgcgccgaaggttatgaaatctccggcagctacgac
ggtgccgacctcgtcgtcgtgaacacctgcggcttcatcgacgaagccgtgcaggaaagc
ctcgacgcgatcggcgaagcgctgaccgaaaacggcaaggtgatcgtcaccggctgcctc
ggcgcgaagtcgagcgcaagcggctcgaacctgatcgaggaagtccacccgaaggtgctc
gccgtcaccggcccgcacgcggtgggcgaagtgatgcaggccgtgcattcgcacctgccg
aagccgcacgacccgttcgtcgacctcgtgcccgcggccggcatcaagctcacgccgcgt
cactacgcatatctgaagatctccgaaggctgcaaccaccgctgcacgttctgcatcatc
ccgtcgatgcgcggcgacctcgtctcgcgcccggtcgccgaagtgatgctcgaagccgag
aacctgttcaagtcgggcgtgaaggaactgctcgtgatctcgcaggacacgagcgcatac
ggcgtcgacgtgaagtaccgcacgggcttctggaacggcaagccgatcaagacgcgcatg
accgacctcgtcgccgcgctcggcgagctcgccgcgcagtacggcgcatgggtgcgcctg
cactacgtgtatccgtatccgagcgtcgacgaagtgattccgctgatggccgaaggcccg
ttcaagggccacgtgctgccgtatctcgacgtaccgttccagcacgcgcacccggacgtg
ctgaagcgcatgaagcgtccggcgaacgcggagaaggtgctcgagcgcgtgcagaagtgg
cgcgagatctgcccggacctgacgatccgcagcacgttcatcgcgggcttccccggcgag
acggaagcgcagttcgaaacgctgctcgacttcatccgcgaagcggaactcgatcgcgtc
ggctgtttcgcgtattcgccggtcgaaggcgcgaccgcgaacgacctcgatggcgcgctg
ccggacgaagtccgcgaggaacgccgcgcacgcttcatggaagtcgccgaggaagtatcg
gcgaaccgcatgcagcgcaaggtcggcaagacgctcaaggtgctgatcgatgaggtgagc
gcagaaggcggcatcggccgcacggcagccgacgcgccggaaatcgacggcgtcgtctac
gtcgagccggcggcgaaggcatcgaagcgctacaaggtcggcgatttcgtgtccgtgaag
atcacgggcgccgacgggcacgatctgtggggcgaggtgtaa
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