Burkholderia semiarida: R0290_10345
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Entry
R0290_10345 CDS
T10421
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bser Burkholderia semiarida
Pathway
bser00300
Lysine biosynthesis
bser01100
Metabolic pathways
bser01120
Microbial metabolism in diverse environments
bser01230
Biosynthesis of amino acids
Module
bser_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R0290_10345 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bser01002
]
R0290_10345 (dapE)
Enzymes [BR:
bser01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
R0290_10345 (dapE)
Peptidases and inhibitors [BR:
bser01002
]
Metallo peptidases
Family M20
R0290_10345 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
XCV59060
LinkDB
All DBs
Position
1:2237318..2238457
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AA seq
379 aa
AA seq
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MSATLALTEQLIARASVTPDDQHCQQIMTERLAALGFECETIASHGVTNLWAVKRGTDGR
DGKLLAFAGHTDVVPTGPLEQWTSPPFIPAHRDGKLYGRGAADMKTSLAAFVVASEEFVA
AHPGHRGAIAFLITSDEEGPATDGTVKVVELLQARGERLDYCIVGEPTSTAELGDVVKNG
RRGSMSGELVVKGVQGHIAYPHLAKNPIHLLAPALAELAAEQWDAGNEYFPPTTWQVSNL
HAGTGATNVIPGHADLLFNFRFSTASTVEGLQARVHAILDKHGLEYTLKWSVSGLPFLTP
RGELSGALENAIRAETGITTELSTTGGTSDGRFIARICPQVIEFGPPNGSIHKIDEHIEL
RFVDPLKNVYRRVLEQLIA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccctagcccttaccgaacagctgatcgcccgcgcgtccgtgacgcccgac
gaccagcactgccagcagatcatgaccgagcgcctcgccgcgctcggcttcgaatgcgag
accatcgcgtcgcacggcgtgaccaacctgtgggccgtcaagcgcggcaccgacggccgc
gacggcaagctgctcgcgttcgcgggccacaccgacgtcgtgccgaccggcccgctcgaa
cagtggacctcgccgccgttcatcccggcccatcgcgacggcaagctgtatggccgcggc
gcggccgacatgaagacgtcgctcgcggcgttcgtcgtcgcgtccgaggaattcgtcgcg
gcccatccaggccaccgcggcgcgatcgcgttcctgatcacgagcgacgaggaaggcccg
gccaccgacggcaccgtgaaggtcgtcgagctgctgcaggcacgcggcgagcggctcgac
tactgcattgtcggcgagccgacgtcgaccgccgagctcggcgacgtcgtcaagaacggc
cgccgcggctcgatgtccggcgaactggtcgtcaagggcgtgcaaggccacatcgcgtat
ccgcacctcgcgaagaacccgatccacttgctcgcgccggcgctcgccgagctcgccgcc
gagcagtgggacgccggcaacgaatacttcccgccgaccacctggcaggtgtcgaacctg
cacgccggcaccggcgcgaccaacgtgatccccggccacgccgacctgctgttcaacttc
cgcttctcgaccgcgagcacggtcgagggcctgcaggcccgcgtgcacgcgatcctcgac
aagcacggcctcgaatacacgctgaagtggtcggtgagcggcctgccgttcctcacgccg
cgcggcgaactgtcgggcgcgctggaaaacgcgatccgcgccgagaccggcatcacgacc
gagctgtcgacgacgggcggcacgtcggacggccgcttcatcgcgcgcatctgcccgcag
gtgatcgagttcggcccgccgaacggcagcatccacaagatcgacgagcacatcgagctg
cgcttcgtcgacccgctgaagaacgtgtaccgacgcgtgctcgaacaactgatcgcctga
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