Burkholderia semiarida: R0290_11205
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Entry
R0290_11205 CDS
T10421
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bser Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bser03400
]
R0290_11205
Enzymes [BR:
bser01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
R0290_11205
DNA repair and recombination proteins [BR:
bser03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
R0290_11205
Prokaryotic type
R0290_11205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XCV59216
LinkDB
All DBs
Position
1:complement(2422313..2423791)
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AA seq
492 aa
AA seq
DB search
MSAQSSVAPAIVWFRDDLRVTDQPALTRAVESGRPLVCVFVDGTDTGAGPALGGAARWWL
HGSLAGLDAALARHGGRLLLLRGDARREIERLVRDTGAAAVYWNRRYPQPQRDADAALKA
SLKAQGVTVESSNGSLLNEPWEVLTGSGGPYQVFTAYWRAARRDRTVAAPLPAPERIAFH
PWPKAVRERALSLDALALRPHAPDWAGGLREAWPAPDEAGAHAQLDTFLTTSLAGYADAR
DRPDRPATSRLSPFLRFGNVSPRQVWHAVQGAANAGGAAYAMHADKFLSELGWREFSYML
LYHFPALATDNFRAQFDAMPWRDDPAALRAWQRGRTGYPLVDAGLRQLWTTGWMHNRVRM
VVASFLIKHLLIDWRAGEAWFRDTLVDADPANNAASWQWVAGCGADAAPYFRIFNPVAQG
RKFDPDGAYVRRWVPELAGLDNTSIHAPWEASPLELDAAGVRLGLDYPAPLVEHAAARAR
ALDALAALPKRH
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcccagtcgtccgttgccccagcgatcgtatggttccgcgacgatctgcgcgtg
acagatcagcccgcactgacgcgcgcggtcgaatcgggccggccgctcgtctgcgtcttc
gtcgacggcacggacacgggcgccgggcccgcgctcggcggcgcggcgcgctggtggctg
cacgggtcgctggccgggctcgacgcggcgctcgcgcggcatggcgggcgcctgctgctg
ttgcgcggcgacgcgcggcgcgagatcgagcgcctcgttcgcgacacgggcgccgcggcc
gtgtactggaaccgccgctatccgcagccacagcgcgacgccgatgcggcgttgaaggcg
tcgctcaaggcgcagggcgtgacggtcgaaagcagcaacggcagcctgctgaacgagccc
tgggaggtgctgacgggcagcggcggcccgtaccaggtattcaccgcttactggcgcgcg
gcgcgccgcgatcgcacggtggccgcgccgctgccggcgcccgagcggatcgcgttccat
ccgtggccgaaggccgtgcgcgagcgcgcgctgtcgctcgatgcgctcgcattgcgtccg
catgcgccggactgggccggcggcctgcgcgaggcgtggccggcgcccgacgaagccggc
gcgcacgcgcagctcgacacgtttctcacgacctcgctcgccggctatgcggacgcgcgc
gatcgacccgaccgccccgcgacgagccggctgtcgccgttcctgcgcttcggcaacgta
tcgccgcgacaggtgtggcatgcggtgcagggcgccgcgaacgcaggcggcgcggcgtat
gcgatgcacgccgacaaattcctgagcgagctcggctggcgcgaattcagctacatgctg
ctgtatcacttcccggcgctcgcgaccgacaacttccgtgcgcaattcgatgcgatgccg
tggcgcgacgatcccgccgcgttgcgtgcgtggcagcggggccggaccggctatccgctc
gtcgacgcgggcctgcgccagctgtggacgaccggctggatgcacaaccgcgttcgaatg
gtcgtcgcgtcgttcctgatcaagcatctgctgatcgactggcgcgcgggtgaagcgtgg
ttccgggacacgctggtcgacgccgatcccgcgaacaacgcggcgagctggcaatgggtg
gccggctgcggcgcggacgccgcgccgtatttccgcatcttcaatccggtcgcgcagggc
cggaagttcgacccggacggcgcgtacgtacggcgctgggtgcccgagctcgccggcctc
gacaacacgtcgatccatgcgccgtgggaagcgtcgccgctggaactcgacgcggccggc
gtgcggctcgggctcgactatccggcgccgctcgtcgagcatgcggccgcgcgcgcccgt
gcgctcgatgcgctggccgcgttgccgaagcgccactga
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