Burkholderia semiarida: R0290_16505
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Entry
R0290_16505 CDS
T10421
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
bser Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bser03000
]
R0290_16505
Transcription factors [BR:
bser03000
]
Prokaryotic type
Helix-turn-helix
LacI family
R0290_16505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
TetR_N
HTH_3
HTH_24
HTH_AsnC-type
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
XCV62993
LinkDB
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Position
2:22551..23603
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AA seq
350 aa
AA seq
DB search
MSDSTKSDARSRRTSGRLTLRDVAEHVGVSQISVSRYFQDPARLSEPLRERIADAVSELG
YVPNLVAGGLASARSRVIGMVIPNISGPIFANTIQSFSDEVTAHGYQLLLASSYFSTDLE
ENAVRGLLGWSPAALVLTSHFHSPGTEELIEQTQVPVLETWDFQPRRKPLQIGFVHQEAG
RIAARHLVERGYRRIAFVLNSAAGDASALERRDGYTEIMREHGRQPIVFAPTEAQPMHAG
REALLALCSARRTADAIIFANDNLAFGALLSAGGAGIRVPEQCAIVGFGDYPMAEMLAPS
LTTVRPPAREIGITAAARIFQLLQEDPPAFDALRKGQQPMSCQLIVRASS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcgactaaaagcgatgcgcgctcacgccgcacgtcgggacgcttgacactg
cgcgacgtggccgagcacgtcggcgtatcgcagatcagcgtgtcgcgctatttccaggat
ccggcgcgactgtccgagccactgcgcgagcggatcgccgatgcggtctctgaactcggt
tacgtgccgaatctcgtcgccggcgggctcgcctcggcgcgcagccgtgtcatcggcatg
gtcattccaaacatctcggggcctatctttgcgaacacgatccagagcttcagcgacgag
gtcacagcacacggttaccagttgctgctcgcatcgagctacttctcgacggatctcgag
gagaacgcggtgcgcggattgctcgggtggtcgccggcggcgctcgtgctcacgtcgcac
ttccattccccgggaaccgaggaactgatcgaacaaacgcaggtgcccgtgctcgaaacg
tgggacttccagccgcggcgcaagccgctgcagatcggtttcgtgcaccaggaagccgga
cgcatcgcggcgcgtcatctggtcgaacgcggctatcgacgcatcgcgttcgtgctgaac
agcgcggcgggcgacgcaagcgcgctcgagcggcgcgatggttataccgagatcatgcgc
gagcatgggcgtcagccgatcgtgtttgcaccgaccgaagcgcagccgatgcacgcagga
cgcgaggcgctgctcgcgctgtgttccgcacgccgcacggccgacgcgatcatcttcgcg
aacgacaaccttgcctttggtgcactgctgtccgcgggcggcgcaggcatccgcgtgccg
gaacaatgcgcgatcgtcggcttcggcgactacccgatggcggagatgctggcgcctagc
ttgacgaccgtgcggccacctgcgcgtgaaatcggcatcacggccgccgcgcggatcttc
cagctgctgcaggaggatccgcccgcgttcgacgcccttcgcaaaggccaacaaccgatg
tcgtgccaactgattgttcgcgcgagcagttga
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