KEGG   Burkholderia semiarida: R0290_16945
Entry
R0290_16945       CDS       T10421                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
bser  Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:bser00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bser02044]
    R0290_16945 (sctD)
Secretion system [BR:bser02044]
 Type III secretion system
  Type III secretion core apparatus
   R0290_16945 (sctD)
SSDB
Motif
Pfam: Yop-YscD_cpl Y4YQ_C T2SSB BON T2SSC
Other DBs
NCBI-ProteinID: XCV63077
LinkDB
Position
2:complement(122373..123722)
AA seq 449 aa
MSTSIIDPHGDGALPGGAAGAGAGSAALASPWNLCFLSGPMYGRTMSLARGANWVGTAAD
CEVILPDREIGAKQVCLQVGALAVTVQNHGGDTGAPVLFNDEPLGAGRRSLTPNDVVTVG
SIRLGIARHAQASVAVPDETDAPDAAREAAWLGWLTGGLRRLGSRRLVIALVALWVGVLL
GALGYGFVAWSGRLPWQHESVLARTHRLQQLLHAYPELAVAPRDDGVIVSGYVSDPAARE
RVAQIVAGVDNAALGNIYVVSDLVATAQTYFSDTALTVTYLGRGRIELTGAAARAQIEPR
IRNYMKDARPALEVVDHVRDADAAAPRTATTLGGTAGIPEITTVFAGDGDQRYIETVDGS
RYFEGARMKEGATVVSIGPDEVVFARNGQRITMPLGGAPASAPEQASAPPVAPLASGAAA
GVARPVPGPTLLPGEPAAGVGVSAKEAAH
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgtcgacgagcatcattgatccgcacggcgacggcgcattgcccggcggcgcggcaggc
gcgggggccggttcggccgcgctcgcgtcgccgtggaacctgtgcttcctgagcgggccg
atgtacggccgcacgatgtcgctcgcgcgcggcgcgaactgggtcggcacggcggccgac
tgcgaagtgatcctgcccgatcgcgagatcggcgcgaagcaggtgtgcctgcaggtcggc
gcgctcgcggtgaccgtgcagaaccacggcggcgacactggcgcgccggtgctgttcaac
gacgagccgctcggcgccggccgccgctcgctgacgccgaacgacgtcgtgacggtcggc
tcgatccggctcggcatcgcacggcatgcgcaggcgagcgtcgcggtgcccgacgaaacg
gatgcgccggacgccgcgcgcgaggccgcgtggctcggctggctcacgggcgggctgcgg
cggctgggcagccggcggctcgtgatcgcgctggtcgcgctgtgggtcggcgtgctgctc
ggcgcgctcggctacggcttcgtcgcgtggtcggggcggctgccgtggcagcacgaatcg
gtgctcgcgcgcacgcaccggctgcagcaactgctgcacgcgtatccggagctggcggtc
gcgccgcgcgacgacggcgtgatcgtgtcgggctacgtgagcgacccggccgcgcgcgag
cgcgtcgcgcagatcgtcgcgggcgtcgacaacgcggcgctcggcaacatctacgtggtc
agcgatctggtcgcgaccgcgcagacctatttcagcgacacggcgctgacggtcacgtat
ctcggccgcggccggatcgagctgacgggcgcggccgcgcgcgcgcagatcgagccgcgc
atccgcaactacatgaaggatgcgcgcccggcgctcgaggtggtcgatcacgtgcgcgat
gccgacgcggccgcgccgcgcacggcgacgacgctcggcggcacggcgggcattccggag
atcacgaccgtgttcgccggcgacggcgaccagcgctacatcgagacggtcgacggcagc
cgctatttcgaaggtgcgcggatgaaggaaggcgcgacggtcgtgtcgatcggcccggac
gaagtggtgttcgcacgcaacggccagcgcatcacgatgccgctcggcggcgcgccggcg
agcgcgcccgagcaggcgagcgcgccgcccgtggcgccgctcgcgagcggcgcggcggcc
ggcgtcgcgcggccggtgccagggccgacgctgctgcccggcgagccggcggccggtgtc
ggggtatcggcgaaggaggcggcgcattag

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