Burkholderia semiarida: R0290_17565
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Entry
R0290_17565 CDS
T10421
Name
(GenBank) hemagglutinin repeat-containing protein
KO
K15125
filamentous hemagglutinin
Organism
bser Burkholderia semiarida
Brite
Glycosaminoglycan binding proteins [BR:
bser00536
]
Heparan sulfate / Heparin
Microbial pathogens
R0290_17565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCV63196
LinkDB
All DBs
Position
2:complement(267034..276561)
Genome browser
AA seq
3175 aa
AA seq
DB search
MNSGIFRLVFSAVRGMLVAVDEYASAHGGGERARVRPATRPVSVDSGISIWFAARATAFA
ALCTFGMQPLVAEAQATLPITPDRSGPTHPVVGVSASGVPLVNITAPKNGVSLNNFTQYN
VGTKGAVLVNSGRDSRTQLAGWVQGNPFLGNNAARVIVNQVTSGNPSQLLGPTEIAGNRA
NLVIANPAGITCAGCGFLNVPRVTLTTGVPTFNPDGTLAGFNVTQGQIGIAGAGLDAHGS
AIDLIARAMTINGQVWADSITAVAGANRVDYASNTAQARNGTDAAPGVAIDVQALGSMFA
NSVRMIGTEAGVGVRDAGSITSLTGDIQVSNNGDVTIAPTARLQSAANTRIDGANVAQQG
TIVSTQATDLNASRALSNAGTISSAGNTNLTAATSFNNSGQAYAGADSAGNLVGGGSVTA
RAANVTSSGTLAAGDNVNLFANDVTLDHGTVNAASAVNVTTNGTLSNVAGTMSGQNVTLS
AGQLVNDSGTISSHSLANVTAQSVSNRSGTLAADALSLNSAGALDNTQGHMTARTAQIAA
TDLTNVAGEIGTSTGALTLTATGNVSNDNGKLAGGNGLTLTANAVSNAQGQIGSVAGDTS
LDVTQSLNNANGKVASANDLSIHTAHLDNSAGSVSAHAARITATDVVNTGGKIGTTDMLT
VTATGAVSNESGAIVGGNGLSVTANSVGNAAGTIGSAAGDTALRATKSLTNVGGTVSSAN
ALVVASDTIDNSNGSMTAVRGVQVQAGDLVNAGGQIGSSSDALSLTATRTVSNDSGKLVG
ASGLSATAGILNNRAGQIGASNGDMTLIVSQVLDNTQGKITAAGALNTQAGTFDNSQGAV
SADAAKLNVAGALTNAGGTIATTHDTTVAAQTVTNRGGTIGSVSGALSVATSGTTDNAGG
KLLASGDTTLTNSGLLNSGGTITGANVTLASGQGAIDNTLGNVAASQSLTSRSGAFDNRS
GLVQATGSVDLDTHGQTFDNGILAGQSTGGQVLGNGVTLTTGALSNAGGAISSSGAATVN
AASVTNDAGSLVADGVLTVRSAGTVSNVAGQIGGNSDVTVSGTTIDNTRGAMHARGALWV
TGDTIRNAQTANSTLPTTAGVPGLTAGMEGASVTLDANQAIDNTSGSIRADRNAKLTAPI
IDNTSGSIQSKGSATLTAANTLVNSQGDINGGQQLTVSTGTLSNDGKLQSSGDVNVTAQG
DLTNAGQIVAGHDLTTTAGGTLDNSGTLSAGNVANVSANSIRNRATGEIIGGNATNIHAN
QSITNEGLIDGGTTTVTAGDTITNAGGRIYGDTVAVGANTVVNDRNAQGVGGVIASRGDL
DIGAQTLMNQNNALMYASNDIRVGGALDANHQATGAAQTVTNNGAQIDAGRDVTIGANRF
ENLNSNFQTTTVTTDSGNQLWYQVPGSTEKIDPSTVYLYQKNSQEIHPGTDYQWALDDDQ
KFILLPSTKYPFAEYAKYTMNGVAGKIDNTAYAAINFGGGGAATQTGAYRTVPADIWATF
GVAPPPDANPAWMTSGPFAMTAGAGLVTGRRGVGSDWFAIKPPTEADVTGAKPPPFSPPS
PSCLTSTNAACAPFQQWYKATVAAYQNLNQALVGYNGDVASRLVQTYTVYTVDVKSTRDV
VTASQPGTVTAGRHITINTPSGVNDKSQIVAGDGNHPRNVQNIGAAGTETFTGSGKAIYT
WVQSGGAFSGDERATSTTNYSPAIPSQTIDLPVVLADPGKPSDPIKSVAAATSAAQGASG
TGVTPVAGKEVGGQVLVGSGVSGVGVGTVSAVKANVGDVVVRTVTPNTRLPNNALYRVTS
DPGSHFLIETDPRFTDYRKWLSSDTMLDALKVDRNTVLKRIGDGFYEQQLVQQQIIQTTG
QRFIGDYTDNQKEYEALMANGVKASQQFGLNVGTALTDAQMAVLTSDIVWLVNQTVTLAN
GSQQTVLVPQVYLRANAADVTGEGTIISGKNVTVDANGAYKNSGTIASRNVTIIHADSID
NSGTVSGGTVLASANQDLNNLGGLIQGNTVALSAGRDLNLTSTTSSAKAANGSATGIDRI
STVNAGTLQAVAGRDLNANAAVIATTGDAVLAANHDVNLNAVRQSSQDAVKWDARNHAEH
SASIDTGTQIATGGNLAIVAGHDVNATAAYANAQGAIGVSAGHDVNLNAGEQSASANDEH
YHKENGFLSSKSTHTIDSSSYTNAVGTTLSGNSVAVQAGNDLTAKAATIAATNDVSLSAG
HDLTVTTGDTASSEYHYKDVKKSGLGSAGAGISYGTNQTIDTSRDTVKGSQGSLIGSTDG
SVSMVAGNKLHVTGSDIVAGKDVTGIAKEVTIDASQTDRHHEETHEVKSSGFTLAVKSPV
IDAIQNVNQQAQGAGGSQDGRAAALHVIAAAGGMADLVGATGNMTKALSDPNGKPEAKIE
LSFGSSHSKTTFTEDSRQNNGSSVKAGGTAAFVATGDKNAGQGNVTIQGSDVNAKDVLLQ
ATNKVNLVNSTDTDSTRSTNESKSASVGVSYGTGGFGVSASMSRAHGDANSDAATQNNTH
VNASNTATVISGGDTNIVGANVNANKVIADVGGNLNLASVQDTSRSEAHQSSSGGGFSVS
QGGASASVSMQNGHASGNYAGVNEQAGIQAGDGGFDINVKGNTDLKGAYIASTATPDKNQ
LTTGTLSFSDIQNSSSYNASSFGLSAGGGVGDGGNNYATHGPTSGKNTGGGQPLYVSESD
SSSASTKSAISAGTITITDQASQKQDVATLNRDTSNLNGTVSKTPDLQQVLSNQSDLINA
AQAAAETIAKQIGSYADKKREEAQTHANNTTDSTLKAHYQQEANSWAEGGDNRVALHIAG
GALTGGLTGGGLGAVGGAAGAGVSAKLAPQLNEIAQSIKDAGPTGNANVDELLGNLTSNV
LAGGAGALVGGGTGALTGASADRFNRQLNQDERQWAKDRSRDFAKFYEDKTGQKITAEQA
QNMLLANGYRLVDAVASKGPGGDQVAVAYISSNAGGLFQTDQYYNDPFKYGNKNGSLTPE
QKALPGHEAHPQLGMAAGAAAGLTTLGAAAPVVAGAWALGAAYDYAGDVISHAMGLSIDA
PNVGKSLVVGGVAGAMTPFYLPLTTLSTSTTGKIVVAGYNAIVGGTASFGGAALKNPSGN
PDLSGALGTAGGFTGAGVQYILPGGIGRFVNQFIQFSLGPIQSAIEAAKNKPTDK
NT seq
9528 nt
NT seq
+upstream
nt +downstream
nt
atgaattccggaatctttcgcttggtcttcagtgccgtgcgcggcatgctggtagcggtt
gacgaatacgcatcggcgcacgggggcggtgaacgcgctcgcgtgcggccagccactcga
cccgtgtcggtggattccggaatctcgatctggtttgcggcacgcgcaaccgcgttcgcc
gcactgtgtacgttcggcatgcagccgctcgtcgccgaagcgcaggcaacgctgccgatc
acgcccgatcgaagcggtccgacccatccggtcgtcggggtgtcggcatcgggcgtaccg
ctcgtcaacattaccgcaccgaagaacggcgtctcgctgaacaacttcacgcagtacaac
gtcggcacgaagggggccgtgctggtcaacagcggccgggattcgcggacgcaactcgcc
ggctgggtgcaaggcaatccattcctcggcaacaacgccgcgcgcgtgatcgtcaaccag
gtcacgtcgggcaaccccagtcaactgctcgggcccaccgagatcgccggtaatcgcgcg
aatctcgtgatcgcgaatccggcaggcatcacctgtgcgggttgcggctttctgaatgtt
ccgcgtgtcacgctgacgaccggcgtgccgactttcaatccggatggcacgttggcaggt
ttcaacgtgacgcaggggcagatcggcatcgccggtgcggggctcgacgcgcatggcagc
gcgatcgacctgatcgcacgcgcgatgacgatcaacggccaggtgtgggcggattcgatc
accgcggtggcgggggcgaaccgggtcgactatgcgagcaacaccgcgcaggcgcggaac
ggtaccgatgccgcgccgggcgtcgcgatcgacgtgcaggcgttgggaagcatgttcgcc
aatagcgtccggatgatcgggaccgaggccggcgtgggtgtgcgagatgccggttccatc
acgtcactgactggcgatattcaagtctcgaacaacggcgatgtgacgattgcgccgacg
gcgcgtcttcagtcggccgcgaatacccggatcgatggcgccaacgtcgcccagcaaggc
acgattgtcagtacgcaggccaccgatctgaacgcgtctcgggcgctgtcgaacgccgga
acgatttcgtcggccggcaacacgaacctgacagccgccacgtcattcaacaatagcggg
caggcatacgcgggcgcggattccgcaggcaatctcgtcggcggtggctccgtcacggcg
cgcgccgcgaacgtgacgagcagcggcacactggcagcgggcgacaacgtcaatctgttc
gccaacgacgtcacgctcgaccacggaaccgtgaacgcggccagcgcggtcaacgtcacg
acgaatggtacgttgtcgaatgtcgccggcacgatgagcggacagaacgtgacactgagt
gcggggcaactggtcaacgactccggcaccatcagttcgcacagcctcgcgaacgtaacc
gcgcaatcggtttcgaaccggtcggggacgttggcggcggacgcactgtccctgaactcg
gccggcgcgctagacaatacgcaggggcacatgactgcgcgcacggcgcagatcgccgca
accgacctcacgaacgtggccggcgagatcggcacgtcgacgggcgcgttgacattgacg
gcgaccgggaacgtgtcgaacgacaacgggaagctcgcgggcggcaatggtctcacgctg
acggcgaatgcggtttccaacgcacagggccagatcggctccgtggcgggcgatacctcg
ctcgacgtcacgcaatcgctgaacaacgcaaacggcaaggtcgcgtccgcgaacgatctg
tcgattcacacggcccatctcgacaactcggctggatcggtgagcgcacacgccgcacgg
attaccgcgaccgatgtcgtcaatacgggcggcaagatcggcaccaccgatatgctgacc
gtgacggcgacgggcgcggtctcgaatgagtccggcgcgatagtcggcggcaatggtctg
tcggtgacggcaaacagcgttggcaatgcggcgggtacgatcggatcggccgccggcgac
acggcgctgcgtgcgacgaagtctctgacgaacgttggcggtacggtaagttcggccaat
gcgctcgtcgttgcaagcgacacgatcgacaactcgaacggcagtatgacggccgtgcgc
ggcgtacaggtccaggcgggggatctcgtcaatgcgggcggtcagatcgggtcatcgtct
gatgcgttgtcgttgaccgcaacccgcacggtgtcgaacgatagcggcaagctggtgggg
gcgagcgggctgtccgcgacagccggcatcctcaataaccgtgcaggccagatcggcgcg
tccaacggcgacatgacgctgatcgtctcgcaggtactcgacaatacccaaggcaagatt
accgctgccggtgcgctgaacacgcaggccggcacgttcgacaattcgcaaggcgcggtt
tcagcggacgcagcgaagctcaatgttgcaggcgcattgacgaatgcaggcggcacgatc
gcgacgacacacgacacgaccgtggcggcgcagaccgtgacaaaccgcggtggcaccatc
ggctccgtctccggcgcattgtcggtggcgacatccggtacgacggacaatgcgggcggc
aagctgctggcctcgggggacacgacgctcaccaattccggcttgctgaactcgggcggt
acgatcacgggggcgaacgtcacgctcgcgtccggacaaggtgcgatcgacaacacgctc
ggcaacgtggcggcgagccaatcgctgacgagccgttcgggggcgttcgataaccggtcg
ggattggtgcaggcgacgggatcggtcgatctcgatacgcacggccagacgttcgacaac
ggcatactggcagggcaatccacgggtggtcaggttctcggcaatggcgtcacgctgaca
acgggagcgctgagcaacgcaggtggtgcgatttcgtcgagcggtgcggcaaccgtcaac
gctgcttccgtgacgaacgatgcgggttcgctcgtggcggacggcgtactgacggtgcga
agcgccggtacggtgtcgaacgtggccggccagatcggcggcaacagcgatgtcacggtg
tccggtacgacgatcgataacacgcgcggtgccatgcatgcgcgcggtgcgctgtgggtg
acgggcgatacgattcgcaatgcgcagactgccaattcaacgctgccgaccaccgcaggc
gtgccgggattgactgccgggatggaaggcgcaagcgtcacccttgatgcgaatcaggcg
atcgacaatacgtccggctcgattcgagcggacaggaatgcgaagctgaccgcaccgatc
atcgacaacacgtcgggcagcatccagtcgaaaggctctgcaacgttgacggcagcgaat
acgctggtcaacagccagggcgacatcaatggtggtcagcaactgacggtctcgaccggg
actttgagcaacgacggcaagctccaatcatcgggcgacgtcaacgtaacggcgcaaggc
gatctgaccaacgccggccagatcgtggccggtcatgatctgacgaccacggccggcggc
acgctggacaacagcggcacgctgtcggcgggcaatgtcgccaatgtgagcgccaattcg
atccggaaccgtgcgaccggtgagattatcggtggcaacgcgaccaacattcacgcgaac
cagtcgatcacgaacgaaggtctgatcgatggcggcacaacgacggtgacggccggggac
acgatcacgaatgccggtggccggatttacggcgacacggtcgcagtgggcgcgaacacg
gttgtcaacgaccggaatgcccagggtgtcggtggcgtgattgcttctcgcggtgacctc
gacatcggggcgcagacgctcatgaaccagaacaacgcgctgatgtacgcgagcaacgac
attcgtgttggcggcgcgctggacgcgaaccatcaggcaaccggtgctgcgcagaccgtg
acgaacaacggcgcgcagatcgacgccggtcgcgacgtcacgatcggtgcaaaccggttc
gagaacctgaattcgaacttccagaccacgaccgtcacgaccgacagcgggaatcagctt
tggtatcaggtgccgggctcgacggagaagatcgacccgtcgacggtctacctgtaccag
aagaacagccaggaaatccatccgggcacggattaccagtgggcgctggacgacgatcag
aaattcatcctgctgccgtcgacgaaatatccgtttgccgagtatgcgaagtacacgatg
aacggggtggcgggcaagatcgataacacggcgtatgccgcaatcaactttggtgggggc
ggcgcagctacacaaactggtgcgtatcggacggtcccggctgacatctgggcgacgttc
ggcgtagcgccgccgccggacgcgaatccggcatggatgacgtcggggccattcgccatg
actgcgggtgctggactggttactggcagacgcggcgttggcagcgattggttcgcgatc
aagccccctactgaagctgatgtgacgggcgcaaaaccgcctcccttcagcccaccgagt
ccttcatgtctgacctcgacaaacgcggcatgcgcaccgttccaacagtggtacaaggcg
accgtcgcggcctaccaaaatctgaatcaggcgctcgttgggtataacggggatgtcgcg
agccggctcgtccagacctataccgtctacacggtagacgtgaaatcgaccagggacgtg
gtaacggcttcgcaacccggcacggttaccgctggccgtcatatcacgatcaacacgccg
tccggcgtcaacgacaagagccagatcgtggccggcgacggcaaccatccgaggaacgtg
cagaacatcggcgcggccggtactgaaacgttcacgggctcgggcaaggcgatctatacc
tgggtgcagtccggcggggccttcagcggtgacgagcgcgcgacctcgacgaccaactac
tcgccggctattccgtcacaaacgatcgatctgccggtggtgctggccgatccgggcaaa
ccgtccgatccgatcaagagcgtggcggcggcgacatccgctgcgcagggcgcaagcggt
acgggcgtgacgccagtagcgggcaaggaagttggcgggcaagtgttggtcggctcgggt
gtgtcgggcgtcggcgtcgggaccgtatcggccgtgaaggccaatgtcggcgatgtagtc
gtgcgcacggtcacgccgaatacgcgcctgccgaacaacgcgctgtatcgggtgacgagc
gacccggggagccacttcctgatcgagacggacccgcgctttaccgattacaggaagtgg
ttgtccagcgacacgatgctggatgcactcaaggtcgatcggaatacggtcctcaagcgc
atcggcgatggcttctacgagcagcagctcgttcagcagcagatcatccagaccaccggc
cagcggttcatcggtgactatacggacaatcagaaggaatacgaagcgctgatggcgaac
ggcgtgaaggcgtcgcagcagttcgggctgaatgtcggcacggcgctgaccgacgcgcag
atggctgtgctgacgagcgacatcgtgtggctcgtgaatcagacggtgacattggcgaac
ggcagtcagcagacggtgctggtgccgcaggtatatctgcgcgcgaacgcggcggacgtg
actggcgaaggcacgatcatctccggcaagaacgtcacggtcgatgccaacggcgcgtac
aagaactcgggcacgatcgctagccgcaacgtcacgatcattcatgccgattcgatcgac
aacagcggtacggtgtcgggtggaaccgtgctcgcgagtgcgaaccaggacctcaataat
cttggcgggttgattcaaggcaacaccgtagcgctgtcggctggccgcgacctcaatctg
acgagcacgaccagctcggcgaaggccgcgaatggcagcgcgaccggcatcgaccgtata
tcgacggtcaatgcgggtacgcttcaagccgtcgccggccgggatctgaacgccaatgcg
gctgtgattgcgacgaccggcgatgccgtgctcgcagcgaaccacgacgtcaatttgaat
gcggttcgccagagcagccaggatgcggtgaagtgggatgcgcgcaatcatgccgagcat
tcagcgtcgatcgacacgggcacgcagatcgcgacgggcggcaatctggcgatcgtggcg
ggccatgacgtgaatgcgacggccgcgtatgcgaatgcgcagggcgcgattggcgtgagc
gccgggcacgatgtcaatctgaatgccggtgaacaaagcgcgagcgcgaacgacgagcac
tatcacaaggaaaacggcttcctgtcgtcgaaatcgacgcacacgatcgattcgagcagt
tacacgaacgcggtgggcacgacgttgtcgggtaacagtgtcgcggtgcaggcaggcaat
gacctgacggcgaaggccgcgacgattgcggcaaccaacgatgtgagtctttccgcgggt
cacgacctgacggttacgacaggggacacggcctcgagcgaatatcactacaaggacgtg
aagaagtcgggcctcggcagtgcgggcgcggggatttcgtacggcacgaaccagaccatc
gataccagccgcgacacggtgaagggttcgcagggcagcctgatcggcagcactgacggc
agcgtgtcgatggtagcgggcaacaaactgcacgtgacgggctccgacattgttgcgggc
aaggacgtgacgggcatcgcgaaggaagtgacgatcgatgcgtcgcagaccgaccgccat
cacgaagaaacgcacgaggtgaagagttcgggtttcacgctggcggtgaagtcgccggtg
atcgatgcaattcagaacgtgaatcagcaggcgcagggtgcgggcggcagccaggacgga
cgtgccgccgcgctccatgtgattgcggcggccggcggcatggctgatctggtcggcgcg
acgggcaatatgaccaaggcattgagcgatccgaacggcaagccggaggcgaagatcgaa
ctgagtttcggctcgtcgcacagcaagacgacattcaccgaggacagcaggcagaacaac
ggcagcagcgtgaaggcgggcggtacggcagcgttcgtcgcgacgggcgacaagaacgcg
ggccaagggaacgtgacgatccagggatcggacgtgaacgcgaaggacgtgctgctgcag
gcgacgaacaaggtcaatctggtcaacagcacggataccgacagcacgcgcagcacgaac
gaatcgaagagcgcgagcgtgggggtgtcgtatggcaccggcggatttggtgtctcggcg
tcgatgtcgcgtgcgcacggcgatgcgaattcggatgcggcgacgcagaacaatacacac
gtcaacgcgagcaatacggcgacggtcatcagcggcggcgataccaatatcgttggggca
aacgtcaacgccaacaaggtgattgcggatgtgggcggcaacctgaatctcgcgtcggtg
caggatacgagccgcagcgaagcccaccagagtagttcgggcggcgggttcagtgtcagc
cagggtggtgcaagcgccagcgtcagcatgcagaacggccatgcgagcggtaactatgcg
ggtgtgaacgagcaggcggggattcaggccggggacggtggctttgacatcaacgtgaag
ggcaatacggacctgaagggggcgtatatcgcgagcacggcgacgccggacaagaatcag
ttgacgacggggacgttgtcgttctcggatattcagaacagttcgagctacaacgcgagc
agcttcgggctcagtgccggtggtggtgtgggtgatgggggcaacaattatgcgacgcac
gggccgacgagcgggaagaatacgggtggcggtcagccgttgtatgtgagcgagagcgac
agcagcagtgcgagcacgaagagcgcgatcagtgccggtaccatcacgatcacggatcag
gcgagccagaaacaggacgtggcgacgctcaatcgtgatacgtcgaatctgaatggcacg
gtcagcaagacgccggatttgcagcaggtgttgagcaatcagtcggatttgatcaacgcg
gcgcaggcggcggcggagacgattgcaaagcagattgggagctacgccgataagaagcgg
gaggaggcgcagacgcacgcaaacaacacgaccgattcgacgctcaaggcacattaccag
caggaggccaacagttgggccgagggtggtgacaatcgtgttgcgctgcacattgccggc
ggtgcgctgacgggtgggttgaccggcggtggcttgggtgcggttggtggcgctgccggt
gctggtgtgtcggcgaagctcgctccgcaactgaatgagattgcgcagtcgatcaaggat
gcggggccgactggtaacgcgaacgtcgatgagctcctggggaacttgacatcgaatgtg
ctggctggtggagctggggcgttggtcggtggcgggactggggcgttgaccggggcgagt
gctgatcggtttaatcggcagttgaatcaggacgagcgacagtgggcgaaggataggtcg
agagacttcgcgaagttctacgaggacaagaccggtcagaagataacggctgaacaagcg
cagaatatgttgctggcgaatggttatcgtttggtggatgcggtggccagcaaggggccg
ggcggtgatcaggttgcggtggcttacatcagcagcaacgcgggcgggttgttccagacg
gatcagtactacaacgatccgttcaagtatgggaacaagaatggatcgttgacgccggaa
cagaaggcgttgccaggacatgaggcacatcctcagttgggcatggcagctggggctgct
gctgggctgacgacgcttggggcagcagcgccggtggtagcaggagcatgggcgttggga
gcggcgtatgactatgcaggagatgtgatcagccatgcgatggggttgtcgattgatgca
ccaaatgttgggaaatcgctggttgtgggtggagtggcaggagcgatgacgccgttctat
ctaccgctcactacactgagtactagcacgacaggaaagatcgtcgttgctggctataac
gcgattgttggtgggacagcttcgtttggaggtgctgctttgaaaaatccgagcgggaat
cctgatctatcgggtgcgttgggtacagcgggtggatttacgggagcgggagtgcaatat
atcctcccgggtggtatcggtagatttgtaaatcagttcatacaattctcgttggggccg
atacagtcggcaattgaggctgctaaaaataagccaaccgataagtga
DBGET
integrated database retrieval system
