Burkholderia semiarida: R0290_18420
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Entry
R0290_18420 CDS
T10421
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bser Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bser03000
]
R0290_18420
Transcription factors [BR:
bser03000
]
Prokaryotic type
Helix-turn-helix
Other families
R0290_18420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_lid_14
PAS_4
HTH_30
HTH_23
AAA
HTH_Tnp_ISL3
HTH_29
AAA_5
HTH_7
HTH_28
AAA_22
HTH_50
AAA_2
HTH_22
AAA_7
AAA_16
HTH_1
NUMOD1
TIP49
Parvo_NS1
HTH_17
HTH_38
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
XCV63361
LinkDB
All DBs
Position
2:complement(473537..475594)
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AA seq
685 aa
AA seq
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MRDDVEQAAGTRAAHPAGWPAPSIQKAHERSETFGLQVSARPDYDVLSNAALVLKREQSR
VLCVHAMPVMETLHEQIVNTQSMIVLTDAEGLILHSIGDDDFLRRAEKVALRPGANWAEN
RQGTNAIGTALAELCPMVVHGDQHFLAANRFLTCSSVPILDPYGDAIGVLDVTGDHRSYH
QHTMALAKMSVQMIENHLFTTTFQETLQVSFHGRPEFLGTLMEGIVAFTADGRFLSANRS
AQFQLGMPLAALRAHTLSSLFDITSAQLIDRMRASTDRHLMLNLGNGAVVCARVHFRRAT
LAEGSRPTDVHDAGAPAARANAAPAPAAGTSAGLSRLNYLDTGDAQVASVIAKVRKVIGK
DIPILITGETGTGKELLAQAIHNDSPRRDAPFVAVNCASIPETLIESELFGYEEGAFTGA
RRKGAIGKLLQANGGTLFLDEIGDMPYPLQVRLLRVLQERLVNPLGSTKTIPVDIAIICA
THRDLRDMIAQNRFREDLYYRLNGLVVRLPPLRDRTDLAVVVQKMLQREAFAGPGRPPLS
VAPDVMELFVRCTWPGNFRQLGNLLRTAAAMVDDDGEIRREHLPDDFFDDLRRGDAQVVQ
AVSEACASPAAPARPAAAGAGPCGVDAFPPADTRLQDVAASAIAAALARHGGNVSAAARA
LGVSRNTIYRKMPAADAARHPSDES
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgacgtagagcaggcggccgggacacgggccgcgcatcccgctggctggccc
gcaccgtcgatccagaaggcccacgagcgctcggagacgttcggcctgcaggtatcggca
cgccccgattacgacgtgctgtcgaacgcggcgctggtgctcaagcgcgagcagagccgg
gtgctgtgcgtgcacgcgatgccggtgatggaaacgctgcacgagcagatcgtcaatacg
cagagcatgatcgtgctgaccgacgcggaagggctgatcctgcattcgatcggcgacgac
gatttcctgcgccgcgcggagaaggtcgcgctgcgcccgggcgcgaactgggcggagaac
cggcagggcaccaacgcgatcggcacggcgctggccgagctgtgcccgatggtcgtccac
ggcgaccagcacttcctggccgcgaaccgcttcctgacctgttcgagcgtgccgatcctc
gatccgtacggcgacgcgatcggcgtgctcgacgtgacgggcgaccaccgcagctatcac
cagcacacgatggcgctcgcgaagatgtcggtgcagatgatcgagaatcatctgtttacg
acgacctttcaggaaacgctgcaggtgtcgttccatggccgccccgaatttctcggcacg
ctgatggaggggatcgtcgcgttcaccgccgacggccgcttcctgtcggccaatcgcagc
gcgcagttccagctcggcatgccgctcgccgcgctgcgcgcgcacacgctgtcgtcgctg
ttcgacatcaccagtgcgcaactgatcgaccgcatgcgcgcgagcaccgaccggcacctg
atgctcaatctcggcaacggcgcggtggtgtgcgcgcgcgtgcactttcgccgcgcgacg
ctcgccgaaggcagccggccgacggacgtccacgatgcgggggcgccggccgcgcgcgcg
aacgcggcgcccgcgccggcggcgggcacgtcggccggcctgtcgcggctcaactatctc
gacaccggcgatgcgcaggtcgccagcgtgatcgcgaaggtacgcaaggtgatcggcaag
gacatcccgatcctgatcaccggcgagaccggcaccggcaaggaactgctcgcgcaggcg
atccacaacgactcgccgcgccgcgacgcgccgttcgtcgcggtcaactgcgcgtcgatt
ccggagacgctgatcgagtccgaactgttcggctacgaggagggcgcgtttaccggcgcg
cgccgcaagggggcgatcggcaagctgctgcaggcgaacggcggcacgctgttcctcgac
gagatcggcgacatgccgtatccgctgcaggtgcggctgctgcgcgtgctgcaggagcgt
ctcgtcaacccgctcggctcgacgaagacgatccccgtggacatcgcgatcatctgcgcg
acgcatcgcgatttgcgcgacatgatcgcgcagaaccgtttccgcgaggatctctactac
cggctgaacggcctcgtggtgcgcctgccgccgttgcgcgaccgcacggatctcgcggtc
gtcgtgcagaagatgctgcagcgcgaagcgttcgcgggcccggggcggccgccgctgtcg
gtcgcgccggacgtgatggaactgttcgtgcgctgcacgtggccgggcaacttccggcag
ctcggcaacctgctgcgcacggcggccgcgatggtcgacgacgacggcgaaatccgccgc
gagcacctgccggacgacttcttcgacgacctgcggcgcggcgacgcgcaggttgtgcag
gccgtctccgaggcgtgcgcgtcgcccgccgcgcccgcccggcctgccgcggcgggcgcc
gggccctgcggcgtggacgccttcccgcccgccgacacgcgcctgcaggatgtcgcggca
tccgcgatcgcggccgcgctggcccgtcacggcggcaatgtgtccgccgccgcgcgcgcg
ctcggcgtgtcgcgcaacacgatctaccggaagatgcccgcggccgacgcggcgcggcac
ccgtctgacgaaagctga
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