Burkholderia semiarida: R0290_19995
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Entry
R0290_19995 CDS
T10421
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bser Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bser03000
]
R0290_19995 (prpR)
Transcription factors [BR:
bser03000
]
Prokaryotic type
Helix-turn-helix
Other families
R0290_19995 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_4
PAS
AAA_2
AAA
PAS_8
AAA_3
AAA_16
AAA_7
PAS_7
nSTAND3
DUF6262
AAA_25
Motif
Other DBs
NCBI-ProteinID:
XCV63656
LinkDB
All DBs
Position
2:851509..853491
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AA seq
660 aa
AA seq
DB search
MDLSSTKPVGPADRTVRPRIWAMGISRLRELFREIAGEFDERADVRIVARAYEDALSAIA
EAGTARPDVIVAAGSNGGFLKTRAQVPVVVVSPTGFDVMQALARARRDAARIALVSAGET
PPEVRRFVAAYGLDVQFASYQSAQEAEACVHDLRDRGIETIVGPGLVTDLAASAGMGAVF
LYSHASVRKAVETALEVAYATHAEAFRRQRLDTLLQHLRDGVVALDAHGRVEAINERLAS
ALGVEPAAAVGRALVDLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTF
QESRAVERLDRALRSQPTTQQFAARYALDDVVGASAPMTRVRDLVRRYAKSDATVLVLGE
SGTGKEMIAQSLHALSARRSYPFVAVNCGAFPEALLESELFGYEEGAFTGARRGGKTGLF
EAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV
EAGTFRADLYYRLNILNIGLPPLRERAADIPALAATLLVQAARREPRLAERVRDTDDALR
VLDATLATLARYRWPGNVRELQNVVERIAVELAEEVDESDPAAPCAALAPGALQAIAPEL
FAARPDAADADDAQTLQARRRRAEADEIRAVLDACGGDRDRACAMLGISKTTLWRKLSAK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcttcgaccaagcccgtcggcccggccgaccgcacggtgcgcccgcgcatc
tgggcgatgggcatcagccggctgcgcgagctatttcgcgagatcgccggcgaattcgac
gaacgcgccgacgtgcgcatcgtcgcgcgtgcctatgaagatgcgctgagcgccatcgcg
gaagccggcaccgcgcggcccgacgtgatcgtcgcggccggctcgaacggcggcttcctg
aaaacgcgcgcgcaggtgccggtggtggtcgtgtcgccgaccggcttcgacgtgatgcag
gcgctcgcccgcgcgcggcgcgacgccgcgcggatcgcgctcgtcagcgccggcgaaacg
ccgcccgaagtgcgccgcttcgtcgccgcatacggcctcgacgtgcagtttgcgtcatat
cagtccgcgcaggaagcggaagcctgcgtgcacgacctgcgcgaccgcggcatcgagacg
atcgtcggccccggcctcgtcaccgatctcgcggccagcgccggcatgggcgcggtgttc
ctgtattcgcatgcgtcggtgcgcaaggccgtcgaaacagcgctcgaagtcgcgtatgcg
acgcacgccgaggcttttcgccgccagcggctcgacacgctgctgcagcacttgcgcgac
ggcgtggtcgcgctcgatgcgcacggccgcgtcgaggcgatcaacgagcggctcgcgtcg
gcgctcggagtcgaacccgcggcggccgtcggccgcgcgctcgtcgacctgcggcccgag
ctgcgcacgctccgtggcgaggacggtgacgcgctcgcgaccgtgcgcggcgtgcgctac
gtcgtgcatcgcgggccgctcgtcgatcgcggcgtcacgtcgggcagcgtgctgacgttc
caggaatcgcgcgcggtcgaacggctcgatcgcgcgttgcgctcgcaaccgaccacgcag
cagttcgccgcgcgctatgcgctcgacgacgtggtcggcgcctcggcgccgatgacgcgc
gtgcgcgacctcgtgcgccgctacgcgaaatccgacgcgaccgtgctcgtgctcggcgaa
agcggcaccggcaaggaaatgatcgcgcagagcctgcatgcgctgtccgcgcggcgtagc
tacccgttcgtcgcggtcaactgcggcgcgtttccggaagcgctgctcgaaagcgagctg
ttcggctatgaggagggcgcgttcaccggcgcgcggcgcggcggcaagaccggcctgttc
gaggccgcgcaccgcggcacgctgtttctcgatgagatcggcgagatgccgccgtcgttg
cagagccggctgctgcgcgtgctgcaggagcgtgaggtgatccgcctcggctcgaccgag
ccgatccgcatcgacgtgcgcgtgatcgccgcgacgcaccggccgctgctcgcggcggtc
gaggccggcacgttccgcgcggatctctattaccggctcaacatcctgaacatcggcctg
ccgccgctgcgcgagcgcgcggccgacattcccgcgctcgcggcgacgctgctcgtgcag
gccgcgcggcgcgagccgcgtctcgccgaacgcgtgcgcgacaccgacgacgcgctgcgc
gtgctcgacgcgacgctggcgacgctcgcgcgctaccgctggccgggcaacgtgcgcgaa
ctgcagaacgtggtcgagcggatcgcggtcgagctggccgaggaagtcgacgaaagcgat
ccggccgccccgtgcgcggcgctcgcacccggcgcgctgcaagcgatcgcgcccgagctg
ttcgccgcgcggcccgatgcggccgacgccgacgacgcgcaaaccctgcaagcgcgccgt
cgtcgagcggaagccgacgagatccgcgcggtgctcgacgcgtgcggcggcgaccgcgac
cgcgcctgcgcgatgctcggcatcagcaagacgacgctgtggcgcaagttgtcggcgaaa
tag
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