KEGG   Burkholderia semiarida: R0290_22945
Entry
R0290_22945       CDS       T10421                                 
Name
(GenBank) ABC transporter substrate-binding protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
bser  Burkholderia semiarida
Pathway
bser02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bser00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    R0290_22945
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bser02000]
    R0290_22945
Transporters [BR:bser02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    R0290_22945
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6 SBP_bac_1 SBP_bac_11 PBP_like_2
Other DBs
NCBI-ProteinID: XCV61900
LinkDB
Position
2:complement(1508642..1509688)
AA seq 348 aa
MKLLGTIAAAAALCIAGAGAPACAQTKTIYVGMNGGPMEKAYTSQVLPDFEKANNVKVVI
VPGTSSDVLAKLLANRNKPQIHVAFLDDGVMARAVSLGVCQKLDDSPVLKELYPFARMKD
DVGAGVQLGMTGIAYNKKLFTEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFLA
INRLLGGNEQNVEPGFSKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFPLTPTGVGDLQ
DKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAGKQIPTN
RLAKMPATMQQSLGNVDDLVRKVTVVDWTAINARRAQWDTRWNRQIER
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgaaactgctcggcacgatcgcggcggccgccgccctttgtatcgcaggcgccggcgcg
cccgcgtgcgcgcaaacgaagacgatctacgtcggcatgaacggcgggccgatggaaaag
gcctatacgagccaggtgctgcccgacttcgagaaggccaacaacgtgaaggtggtgatc
gtgcccggcacgtcgtcggacgtgctcgcgaagttgctcgcgaaccgcaacaagccgcag
atccacgtcgcgttcctcgacgacggcgtgatggcgcgcgcggtgagcctcggcgtatgc
caaaaactcgacgattcgccggtattgaaggagttgtacccgttcgcgcggatgaaggac
gacgtcggcgcgggcgtgcagctcgggatgaccggcatcgcgtacaacaagaagctgttc
accgagaaaggctgggcgccgccgacgtcgtggatggatttcgccgatccgaaatacaag
ggcaaggtcgtgttccagtcggcgtcgagcagtacgttcgggctgcacggcttcctcgcg
atcaaccggctgctcggcggcaacgaacagaacgtcgagccgggcttcagcaagtgggcg
agcacggtcgggccgaacgtcgtcgaatacatcccgaactcggcgaagatctcggagatg
gtgcagacgggcgaagccggcctgttcccgctgacgccgaccggcgtcggcgacctgcag
gacaagggcatccccgttgcgtatgcgaatccgaaggaaggcccggtgctgctgctcgtc
gacctgtgcgtggtcgctaacaatcccgatccgcaactcgcgcagaagctcgcgcagttt
ttgctgtccgcgcccgcgcagacgaaggcggccgaggccggcaagcagattccgaccaac
cgtctcgcgaagatgcctgccacgatgcagcaaagcctcggcaacgtcgacgatctggtg
cgcaaggtgacggtggtcgactggaccgcgatcaacgcacgccgtgcgcagtgggatacg
cggtggaatcggcagatcgagcggtga

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