Burkholderia semiarida: R0290_24175
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Entry
R0290_24175 CDS
T10421
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bser Burkholderia semiarida
Pathway
bser03030
DNA replication
bser03410
Base excision repair
bser03420
Nucleotide excision repair
bser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R0290_24175 (polA)
03410 Base excision repair
R0290_24175 (polA)
03420 Nucleotide excision repair
R0290_24175 (polA)
03440 Homologous recombination
R0290_24175 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bser03032
]
R0290_24175 (polA)
03400 DNA repair and recombination proteins [BR:
bser03400
]
R0290_24175 (polA)
Enzymes [BR:
bser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R0290_24175 (polA)
DNA replication proteins [BR:
bser03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
R0290_24175 (polA)
DNA repair and recombination proteins [BR:
bser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
R0290_24175 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R0290_24175 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
XCV62133
LinkDB
All DBs
Position
2:1793938..1796691
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVTDRVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLSQYDSLDGVIEHAGEIKGVVGDNLRRALDFLP
LGRKLVTVDTSCDLAPHLESIEASLKTDGEARELLRDIFARYGFKTWLREVDSAPAEGGG
ADAPEGEPAPVVAADIAREYDTIQTWAQFDAWFAKIDAAALTAFDTETTALDPMLARLVG
LSFSVEPGKAAYLPVAHRGPDMPEQLPLDEVLARLKPWLESADRKKVGQHLKYDAQVLAN
YDIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
DQAAAYAAEDADITLQLHHAMYPQVAREPGLERVYRDIEMPVSLVLRKMERTGVLIDDAL
LQAQGSEIATRLIELEGQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKVLLEHRGLSKLKSTYTDKLPRMVNPVTGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FTRYPGVAQYMEDTRATAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDKLASRMIMQVHDELVLEVPERELPLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgcgacgacctttatgccgactat
aaggcaaaccgcccgtcgatgccgcccgatctcgcgttgcaggtcgagccgatccacggc
gcggtgcgcgcgctcggctggccgctgctgatggtcgaaggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagccgaacggcacgggatgaacgtgatcgtgtcgaccggc
gacaaggatctcgcgcagctcgtgaccgatcgcgtcacgctcgtcaacacgatgaccaac
gaaacgctcgatcgcgacggcgtgatcgcgaagttcggcgtgccgcccgagcggatcatc
gactacctcgcgctgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaagtggctgtcgcaatacgacagcctcgacggcgtgatcgaacac
gcgggcgagatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgatttcctgccg
ctcggccgcaagctcgtgaccgtcgacacgtcgtgcgatctcgcgccgcatctcgaatcg
atcgaggcgtcgctgaagacggacggcgaagcacgcgagctgctgcgtgacatcttcgcg
cgctacggcttcaagacctggctgcgcgaagtcgacagcgcacccgcggaaggcggcggc
gccgatgcgccggaaggcgagccggccccggtcgtcgcagcggacatcgcgcgcgaatac
gacacgatccagacctgggcgcaattcgacgcgtggttcgcgaagatcgacgcggccgcg
ctgaccgcgttcgacaccgagacgaccgcgctcgatccgatgctcgcgcggctcgtcggg
ctgtcgttctcggtcgagccgggcaaggccgcctatctgcccgtcgcgcaccgcggcccc
gacatgcccgagcagcttccgctcgacgaagtgctcgcgcgcctgaagccgtggctcgag
tcggccgatcgcaagaaggtcggccagcacctgaagtacgacgcgcaggtgctcgcgaac
tacgacatcgcgctgaacggcatcgagcacgacacgctgctcgaatcgtacgtgctcgaa
tcgcaccgcacgcacgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtacgaggacgtggcgggcaagggcgcgaagcagatcggtttcgacgaagtggcgctc
gaccaggccgctgcgtacgcggccgaggatgcggacatcacgctgcagctccatcatgcg
atgtatccgcaggtcgcgcgcgaaccgggcctcgaacgcgtgtaccgcgacatcgagatg
ccggtgtcgctcgtgctgcgcaagatggagcgcaccggcgtgctgatcgacgacgcgctg
ttgcaggcgcaaggcagcgagatcgcgacgcggctcatcgagctcgaggggcaggcgtac
gagctggccggcggcgaattcaatctcgggtcgccaaagcagatcgggcagatcttcttc
gagaagctgcagttgccggtcgtgaagaaaacgccgagcggcgcgccgtcgaccgacgag
gaagtgctgcagaagctggccgaggactacccgctgccgaaggtgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctataccgacaagctgccgcgcatggtgaatcccgtc
accggccgcgtgcacacgaactatgcgcaagcggtcgcggtcacgggccggcttgcgtcg
aacgaccccaatcttcagaacattccggtgcgcacggccgaaggtcggcgcatccgcgag
gcattcatcgcatcgccgggccaccggatcgtgtcggccgactactcgcagatcgagctg
cggatcatggcgcacatttccggcgacgcgtcgctgctgcgcgcgttctcgcagggcgag
gacatccatcgcgcgacggccgccgaagtgttcggcgtgacaccgctggaggtcaattcc
gaccagcgccggatcgcgaaggtgatcaacttcgggctcatctacgggatgagcgcgttc
gggcttgcatcgaacctcggcatcacgcgcgacgcggcgaagctctatatcgaccgctat
ttcacccgctatccgggtgtcgcgcagtacatggaagacacgcgtgcgaccgcgaaggag
aagggctacgtcgaaaccgttttcggccgccgcctgtggctgcccgagatcaacggcggc
aacggcccgcgccgccaggcggccgagcgcgcggcgatcaatgcgccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgcggtggacgactggctgacgcgcgacaag
ctcgcgtcgcggatgatcatgcaggtgcacgatgaactggtgctcgaggtgccggaacgc
gagctgccgctcgtgcgcgagaaactcccggaaatgatgtgcggcgtcgcgaagctgaag
gtgccgctggtcgccgaggtgggcgccggcgcgaactgggaagaggcacactga
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