Burkholderia semiarida: R0290_26220
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Entry
R0290_26220 CDS
T10421
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bser Burkholderia semiarida
Pathway
bser00100
Steroid biosynthesis
bser00909
Sesquiterpenoid and triterpenoid biosynthesis
bser01100
Metabolic pathways
bser01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
R0290_26220
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
R0290_26220
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bser01006
]
R0290_26220
Enzymes [BR:
bser01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
R0290_26220
Prenyltransferases [BR:
bser01006
]
Terpene biosynthesis
Squalene/phytoene synthase
R0290_26220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
XCV62519
LinkDB
All DBs
Position
2:2257810..2258877
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AA seq
355 aa
AA seq
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MTTHTDPAYLLGDLLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDR
RAALLTDLRDDIERLGDGAALSRSLEDVTRMQTDSHEHLLLGSMEPMLALLRAQPEVDRA
SIRKVVATLTAGMEFDLRTFPDERSGQVASLSTRGELDRYTYLVAGCVGEFWTDMTGAHT
RAARGWDLPDMREKGIRFGKALQITNILRDCAKDLRIGRCYLPDDVLRAHGLVVADLMRP
DASARARGVLVDLLRGALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLGLLAGHA
AWLDPAQPAKVPRKRVYRIMAASLALVGSNTAIRARLSALADAVTARLARPASQH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccataccgatcccgcctatctgctcggcgacctgctgaagaacgtatcccgc
tccttctacctgacgctgcgcgtgctgcccgacggcatgcgcgacccggtcggcctcgcg
tatctgcttgcacgcgcggccgacacgatcgccgacacggcgctcgtcgcgcccgaccgg
cgcgcggcgctgctgaccgacctgcgcgacgacatcgagcgtctcggcgacggcgcggcg
ctgtcgcgttcgctcgaggacgtgacgcggatgcagaccgattcgcacgaacacctgctg
ctcggctcgatggagccgatgctcgcgctgctgcgcgcgcagccggaggtcgatcgcgcg
tcgatccgcaaggtcgtcgcgacgctcaccgcggggatggaattcgacctgcgcacgttt
ccggacgagcggtcggggcaggtcgcatcgctgtccacgcggggcgaactcgaccgctac
acgtacctcgtcgccggctgcgtcggcgaattctggaccgacatgacgggcgcgcacacg
cgcgccgcgcgcggctgggacctgccggacatgcgcgagaagggcattcgtttcggcaag
gcgctgcagatcacgaacatcctgcgcgattgcgcgaaggacctgcgcatcggccgctgc
tacctgcccgacgacgtgctgcgcgcgcacgggctcgtcgtggccgacctgatgcggccc
gatgcgtcggcgcgcgcacgcggcgtgctggtcgacctgctgcgcggcgcgctcgaccag
tatcgcgacgcatgcctgtatacgctcgcgatcccgcgtcgtttcgtgcggcttcggctc
gcctgcctgtggccgatcatgatcggcctcgaaacgctcggactgctggccggccacgct
gcgtggctcgacccggcgcagccggccaaggtgccgagaaagcgcgtctaccggatcatg
gcggcgtcgctcgcgctggtcggttcgaacacggcgatccgcgcgcgcctgagcgcgctc
gccgacgccgtgaccgcgcggctcgcgcgccccgcgtcgcagcactga
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