Burkholderia semiarida: R0290_29730
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Entry
R0290_29730 CDS
T10421
Name
(GenBank) YadA-like family protein
KO
K21449
trimeric autotransporter adhesin
Organism
bser Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bser02000
]
R0290_29730
Transporters [BR:
bser02000
]
Other transporters
Pores ion channels [TC:
1
]
R0290_29730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
Baculo_PEP_C
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
XCV64845
LinkDB
All DBs
Position
3:complement(245032..248649)
Genome browser
AA seq
1205 aa
AA seq
DB search
MFARWVVVSEISRSTSRTKRETPAASSPSTLPFSYRTRAICITLGCAVALPYAAPAFAGV
GGTDAGMSNSNGSGWIKGSSGGGGVQYGDTGVGFVGDGDCSMLTSGPGLWAGVYGSGVNY
LGGLFGFGAQNSMTSWGDATNAGANAGIVPFSGSEQVFGNVTYAPNNTQSNNFTTAFGLN
SFAVGCGAHATGMSATALGWGTTASGVGSFATGLYSTASGQGSTAIGVSPVASETDTIAI
GTLATANAVSGIAIGANTHASRNNAVAIGGNSSAPDAGAQAIASGAVAIGADDTAGAKAA
GINAIAVGGQANVVDGATSGIAVGRGATVKGAYGIAEGDGAISGGVGQNVAIGSSGTTAN
GGTLNGGAVAIGIGQSATGDGAVAIGNDNAASGAGSVAIGTTATASDSSVALGYSARATG
TNGSAAIGNSAIATGADALAFGNGAMASGDVGAVAVGRSAAATGANATAVGANALASGAG
AVALAQSAIASGQNAVAIGAESTANVANSIALGNRSTTTGAATATTGGAGTVGDTTIAGQ
SFGPYAGADSAGGVVSVGAVNGERRIQNVGAGLVSAASTDAINGSQLYAVASTTIADIGS
LSTSTSTGIGSLSTGLSSTNSVVASLSTSTSTGMSTTTSSIGSLSTGLSSTDRSVASLST
STSTGLSSATSSINSLSTSTTSSVASLSTGVSTVTSSITSLSTSTSTAIRSAKTHYFSVN
DNGTQQGNYADDGATGVDALAAGVNATAEGAGSVAVGDSSHAASVGSVSVGRSASAAGRY
AVAIGSRNTASGDGALAIGSSNEATEDDTIALGNKAVARATGAQAFGAAASATAEDALAF
GASATASVANSIALGANSVTGNATGMSGETIGGIGYFFAGNAPEGVVSVGQPGHERQITN
VAAGQLSPTSTDAVNGSQLHATNDALNSLSTSTVSNISSLSTGIGSLSTGLSTTNSTVAS
LSTSTSTAINSLSTGLSTTDSTVTSLSTSTSTGIGSLSTGLSTTNSTVASLSTGVTNINN
TLSSLSTTITHDSGVAADLNGTGGDSPTVTAGSNSVAIGRNSTDGGRENVVSVGNDTQQR
QIVNVAPGTEGTDAVNVNQLKQVQTTLSSALSDEQTQINSLGSQLQQTDQMAKEGIAAVG
AMASIPQLDRDANFGMGIGTASFLGQKAMAVSMQARITENLKASLNGGFSGNQKVVGAGM
LYQWK
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgcgaggtgggttgtcgtttcggaaatttcccgctcgacaagcagaaccaagcgg
gaaacgccggcggcgtcgtccccctcgacactgccgtttagttaccggacgcgtgcgatc
tgcatcacgcttggatgtgcggttgcactcccgtacgcggcgccggcgttcgccggagtc
ggagggaccgatgcggggatgtccaactcgaatggctcgggatggattaaggggtcgagc
ggtggcggtggagtccaatatggcgatacgggcgttggcttcgtcggtgacggcgactgt
tcgatgcttacttccggtccgggtttatgggccggcgtatatggatcgggtgtcaattat
ctcggcgggttgttcggattcggcgcgcagaattcgatgacttcgtggggcgatgcgaca
aatgcgggcgcgaatgccggcattgtgccgttcagcggttcggagcaggtattcggtaat
gtcacgtacgcaccgaataatactcagagcaacaacttcacgaccgcatttggtctgaac
tcttttgcggtgggatgtggagcgcatgcaaccgggatgagtgcgaccgcactgggatgg
ggcaccaccgcgagtggtgtcggcagtttcgcgacaggcctctacagtactgccagcggt
cagggcagtaccgctatcggcgtcagtccggtagcgagcgagaccgatacgatcgccatc
ggaacgctcgcgaccgcaaatgccgtcagcggaattgcaatcggcgcaaacacgcatgct
tcacggaacaatgccgtcgcaatcggtggaaattcgtctgcgcccgatgcaggtgctcaa
gcgatcgccagcggcgccgtagcgatcggtgccgacgacacggctggagcgaaagctgcg
ggaatcaacgctattgctgtcggtggtcaggccaatgtcgtcgacggggctacgtccggc
atcgcggtcggtcgcggggcgaccgtcaagggcgcatacgggatcgcggagggcgatggc
gctatctcgggcggagtcgggcagaacgtcgcaatcggctcgtccggcacgaccgcaaac
ggcggtacgctgaacggcggtgccgtggcgatcggcatcggccagtcggcgaccggcgat
ggggcggttgcgatcggcaacgacaacgctgcatcaggcgccggctcggtagccatcggc
accaccgcgaccgcgagcgacagctctgtcgcgcttggctattcggcacgcgcgaccggt
acaaacggctcggctgcgatcggcaattcggcgatcgcgacaggcgcggacgcgctcgct
ttcggcaacggggcgatggcgagcggtgatgtcggtgcagtcgcggtcggccggtctgcc
gccgcgacgggcgccaatgcgaccgcagtcggcgcgaacgcgcttgcatcgggggccggc
gcggtcgcgctggcgcagagcgcgattgcgtcagggcagaatgctgtcgcaatcggtgcc
gagtcgaccgcgaacgttgcgaattcgatcgcgcttggcaacaggtcgacgacaacggga
gcggcaaccgcgacgaccggcggggccgggacggtcggcgacaccacgatcgcggggcag
agcttcggcccgtatgccggcgccgattctgcgggcggcgtggtcagcgtgggggcagtc
aacggcgagcgtcgcatccagaacgttggtgccggcctcgtcagcgcagcgagcaccgac
gcgatcaacggaagccagctttatgccgtggcgagtacgacgatcgccgacatcggctcg
ctgtccacgtcgacgtcgacgggcatcggctcgttgtcgaccggcctgagctcgaccaac
agcgtggtcgcttcgctgtcgacgtcgacttcgaccggcatgtccacgaccactagctcg
attggctcgctgtccacgggactcagttcgaccgaccgttcggtggcgtcattgtcgacg
tctacgtcgaccggcctgtcgtctgcgaccagctcgatcaactcgctgtccacgtcgacc
acaagcagcgtcgcatcgctgtccactggtgtatcgaccgtcaccagctcgatcacgtcg
ctatccacgtcgacgtcgacggcgattcggagcgccaagacgcactacttcagcgtgaac
gacaacggcacgcagcaaggcaactacgcggacgacggtgcaacaggcgtcgatgcgctc
gcggctggcgtgaacgccaccgcggagggagccggcagcgtcgccgtcggcgacagctcg
cacgcggcgtcggtgggctcggtgtcggtcggtcgcagcgcttcggcggccggccgctac
gcggtggcgatcggctcgcgcaatacggccagcggcgacggcgcgctcgcgatcggcagt
tcgaacgaagcgaccgaggacgacacgatcgcgctcggcaacaaggccgttgcgcgtgcg
accggtgcgcaggcattcggggcagcggcatcggcgaccgccgaagacgcgctcgcgttc
ggcgcgtcggccacggcgagcgtcgcgaattcgattgccctcggcgcgaactcggtcacg
ggcaatgcgaccggcatgtcgggcgaaacgatcggcggcatcggctacttcttcgcgggc
aacgcaccggagggggtcgtgagcgtgggacagccgggccacgaacggcagatcacgaat
gtcgctgcaggccagctgtcgccgacgagcacggacgcggtcaacggcagccagctccac
gcgacgaacgacgcgctgaacagcctgtcgacatcgactgtgtcgaacatctcttcgctg
tcgactggcatcggttcgttgtcgaccggcctcagcacgacgaacagcaccgtcgcgtca
ctgtctacgtcgacgtccacggctatcaattcgctgtcgaccgggctgagtacgacggac
agcaccgtcacatcgctgtccacgtcgacttcgacgggcatcggttcactgtcgacaggc
ctgagcacgaccaacagcacggtcgcatcgctgtcgaccggcgtgacgaacatcaacaac
acgctgagttcgctgtccacgacgatcacccacgatagcggcgtcgcggctgacctgaac
ggcaccggcggcgatagtccgaccgttacggccggatcgaattcggtcgcgatcggccgg
aactcgaccgacggtgggcgcgagaatgtcgtgtcggtcggcaacgatacgcagcagcgc
cagatcgtcaacgtcgcgccgggcacggaagggaccgacgcggtgaacgtgaatcagctg
aagcaggtgcagacgacgttgtcgtcggcgctgtcggacgagcagacgcagatcaattcg
ctgggatcgcagctccagcagactgaccagatggcgaaggaaggcatcgcggccgtcggc
gcgatggcatcgattccacagctcgatcgcgacgccaatttcgggatgggcatcggtact
gcgtcgttcctcggtcagaaggccatggcggtcagcatgcaggcgcgcattaccgagaac
ctcaaggcgtcgctcaacggtggcttcagcggcaaccagaaggtggtcggcgccgggatg
ctgtaccaatggaagtag
DBGET
integrated database retrieval system
