Burkholderia semiarida: R0290_31065
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Entry
R0290_31065 CDS
T10421
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bser Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bser03032
]
R0290_31065
03400 DNA repair and recombination proteins [BR:
bser03400
]
R0290_31065
Enzymes [BR:
bser01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
R0290_31065
DNA replication proteins [BR:
bser03032
]
Prokaryotic type
DNA Topoisomerases
R0290_31065
DNA repair and recombination proteins [BR:
bser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R0290_31065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XCV64213
LinkDB
All DBs
Position
3:complement(545173..546201)
Genome browser
AA seq
342 aa
AA seq
DB search
MKQHASGTVAALRHVDDRHPGYTRRRLRNGFAYYAQDGTRIRDAAEIARIDALAIPPAYT
DVWICADPLGHLQATGRDARGRKQYRYHPQWRATRDANKYARMAAFARALPRIRARVTRD
LALPGMPRDKVVATIVRLLDTTLARIGNAEYARENGSYGLTTLRKRHLKIQPGRVRLRFA
GKSGIEHDVTVDDARVARIVRRCAELPGHELFQYVDDDGVRHPVGSSDVNDYLREAGGAD
FTAKDYRTWAGSVHALGLLRRTPHRGVTHARKQIVETVRAVADLLRNTPAVCRRCYIHPA
VLDAFESGALATLAVRRTPRGLRADEAAFVALLVSASTRAAR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcacgcttctggcacggtcgccgcactgcgccatgtcgacgaccgccacccc
ggctacacgcgccgccggctgcgcaacggcttcgcgtactacgcgcaggacggcacgcgc
attcgcgatgccgcggaaatcgcccgcatcgacgcgctcgcgatcccgcccgcctatacc
gacgtgtggatctgcgcggatccgctcggccatctgcaggcgacgggccgcgacgcgcgc
gggcgcaagcagtatcgctatcacccgcagtggcgcgcgacccgcgatgcgaacaagtac
gcgcggatggccgcgttcgcgcgggcgctgccgcgcatccgcgcgcgcgtcacgcgcgat
ctggcgttgccgggcatgccgcgcgacaaggtcgtcgcgacgatcgtccgcttgctcgac
acgacgctcgcgcggatcggcaacgcggaatacgcgcgcgaaaacggctcgtacgggctg
acgacgctgcgcaagcgccatttgaagatccagcccggccgggtgcgcctgcgcttcgcc
ggcaagagcgggatcgaacacgacgtgacggtcgacgacgcgcgggtcgcgcggatcgtg
cggcgctgcgcggagctgcccggtcacgagctgttccagtatgtggacgacgacggcgta
cgccatccggtcgggtcgtccgacgtgaacgactacctgcgcgaggccggcggcgccgat
ttcaccgcgaaggattaccggacgtgggccggcagcgtgcacgcgctgggattgttgcgg
cgcacgccgcatcgcggcgtcacgcatgcgcgcaagcagatcgtcgagaccgtgcgcgcg
gtggccgacctgctgcgcaacacgccggccgtctgccggcgctgctacattcatccggcc
gtgctcgacgcgttcgagtccggcgcgctcgccacgctcgcggtccggcgtacgccgcgc
ggcctgcgcgcggacgaagcggcgttcgtcgcgttgctggtttccgccagcacgcgcgcg
gcgagatga
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