Burkholderia semiarida: R0290_32425
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Entry
R0290_32425 CDS
T10421
Name
(GenBank) porin
KO
K03285
general bacterial porin, GBP family
Organism
bser Burkholderia semiarida
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
R0290_32425
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
XCV64473
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Position
3:874521..875705
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AA seq
394 aa
AA seq
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MIKKTVVLGLVSIGSVGAHAQSSVTLYGVVDAGIAYTNNQGGASNIQQTSGKLSGSRWGL
KGAEDLGGGVQAVFTLESGFRPSDGGLGQGGRLFGRSAYVGLGKKGLGTLTFGRQYEPIT
DLVAPYSGPGFWSPATHVGDNDNLNQSFRLNNAVKFRSDTIAGFTADLLYAFSNQANGGA
GTGFSNNNAWGASANYVNGPLSFGGGYVRFNHPNAASNTSGAVGGATSTTGNDYSGAFFY
GLNGGVLKQQIGAVGANYALGRATLGFAWSHTQLDYLDGSSRKFNNYDVNARYQLTPAAT
LIGVYTFTDGRASGLPGTSGQTLKPRWHQFTLGFDYALSKRTDIYVSGIYQLAAGDASTS
TSGGYRKIAAISNIGSASSTNRQLAFVSGLRVKF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaaaacggtggtactgggtttggtttcgatcggttcggtcggcgcgcatgcg
cagagttcggtgacgttgtacggcgtggtcgatgccggcatcgcgtatacgaacaaccag
ggcggcgcgagcaacatccagcagacgagcggcaagctgagcggcagccgctggggcctg
aaaggcgcggaagatctcggcggcggcgtgcaggcggtcttcacgctcgaaagcgggttc
cgcccgagcgacggcggactcggccagggcgggcgcctgttcggccgctccgcgtacgtg
ggcctcggcaagaaaggcctcggcacgctgacgttcggccgtcagtacgagccgatcacc
gatctcgtcgcgccgtactcggggccgggtttctggtcgccggccacgcacgtgggtgac
aacgacaacctgaaccagagcttccggctgaacaacgcggtgaagttccgcagcgacacg
atcgccggcttcacggccgacctgctctatgcgttcagcaaccaggccaatggcggtgca
ggcaccgggttctcgaacaacaacgcgtggggcgcatcggcgaactacgtgaacgggccg
ctgtcgttcggcggcggctatgtgcggttcaatcatccgaatgcggcgtcgaatacgagc
ggcgcggtgggcggtgcgacctcgaccaccggcaacgactacagcggcgcgttcttctac
gggctgaacggcggcgtactgaagcagcagatcggcgcggtgggcgcgaactacgcgctt
ggccgcgcgacgctcggcttcgcgtggagccacacgcagctcgactatctcgacggctcg
tcgcgcaagttcaacaactacgacgtgaacgcgcgctaccagctcacgccggcggccacg
ctgatcggtgtctatacgtttaccgacgggcgcgcgagcggcctgccgggcacgagcggc
cagacgctgaaaccgcgctggcaccagttcacactcgggttcgactatgcgctgtcgaag
cgcaccgatatctacgtgtcgggcatctaccagctcgcggccggcgatgcgagcacctcg
acctcgggcggctatcgcaagatcgcggcgatctcgaacatcggcagcgcatcgtcgacg
aaccgtcagcttgcattcgtcagcgggctgcgcgtgaagttctga
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