Burkholderia semiarida: R0290_32960
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Entry
R0290_32960 CDS
T10421
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bser Burkholderia semiarida
Pathway
bser02020
Two-component system
bser02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R0290_32960
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R0290_32960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bser03021
]
R0290_32960
Transcription machinery [BR:
bser03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R0290_32960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XCV64576
LinkDB
All DBs
Position
3:complement(994036..995469)
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AA seq
477 aa
AA seq
DB search
MPVSLALQMRQHLALTPRLQQSLRLLQLSSLEFQQELRQALDMNPFLEDGPGDDETAAAT
PEQPTEAAVPETAPERDEIRPPDGEVPFTAAPAPRGTSRQGDDTDGLSPGEWMAAEPSLH
QQLHDALRLYPLNKRDREAARLVIDALDDDGYLRQELPELLVAADPAWLLSEQDLAVALR
LVQMLDRPGIAARSLSECLVLQLDAIPAGTPALAEAKAIAREHLERLARRETAEIQRRLG
CNQQTLQAACALVRGLDPRPGNHYGSTRGDYVVPDVIVRQVRDEWIVTINPAVLPRARLH
ERYATLFAQSSGERDSPLGQQLQEARWLIRNVQKRFDTIQRVGECIVARQRDFFRYGEIA
MKPLVLRDIAEELDLHESTVSRATGNKYMATPHGTFEFKHFFPRKLEAAGKGVCSASAAK
VLIRDMIAAERHTDPLSDVALAENLAGRGILLARRTVTKYRQAMKIPPADLRRRDAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctcgcttgcgctgcagatgcgacagcatctcgcactcacgccgaggcttcag
cagtcgctgcggctgctgcagttgtcctcgctcgaatttcaacaggaattgcgtcaggcg
ctcgacatgaacccgtttctcgaagatggcccgggcgacgacgaaaccgctgccgcgacc
cccgagcaaccgaccgaagcggccgtgcctgaaacggcgcccgagcgcgacgaaatccgc
ccgccggacggcgaggtgccgtttaccgccgcgcccgcgccgcgcggtacgagccgccag
ggcgacgacaccgacgggttgtcgcccggcgaatggatggccgccgagccgtcgctgcat
cagcaactgcacgatgcgctgcggctctatccgctcaacaaacgtgatcgcgaggccgcg
cgcctcgtgatcgatgcgctcgacgacgacggctacctgcggcaggaactccctgaactg
ctggtcgccgccgatcccgcgtggctgctgtcggagcaggatctggcggtcgcgctgcgg
ctcgtgcagatgctcgaccggccgggtatcgccgcgcgttcgttatccgaatgcctggtg
ctgcaactggacgcgattccggccggcacgccggcgctcgcggaagcgaaagcgatcgcg
cgcgagcatctggagcggctcgcgcgccgcgagacggccgaaatccagcggcgcctcggc
tgcaatcagcagacgctgcaggccgcctgcgcgctggtgcgcgggctcgacccgcgcccc
ggcaatcactacggcagcacgcgcggcgactacgtggtgcccgacgtgatcgtgcgtcag
gtgcgcgacgagtggatcgtcacgatcaatccggccgtgctgccgcgtgcgcggttgcac
gagcgctatgcgacgctgttcgcgcagtcgagcggcgagcgcgattcgccgctcggccag
caattgcaggaagcgcgctggctgatccgcaacgtgcagaagcgcttcgacacgatccag
cgcgtgggcgaatgcatcgtcgcgcggcagcgcgatttcttccgctacggcgagatcgcg
atgaagccgctcgtgctgcgcgacatcgcggaggaactcgacctgcacgaatcgaccgtc
tcgcgcgcgaccggcaacaagtacatggccacgccgcacggcacgttcgagttcaagcat
ttcttcccgcgcaagctcgaggcggctggcaagggcgtgtgctcggcctccgccgcgaag
gtgctgatccgcgacatgatcgcggccgagcggcataccgatccgctatccgacgtcgcg
ctcgccgaaaatctcgcgggccgcggcattcttcttgcgcgtcggacggtgaccaagtat
cgccaggcgatgaagattccgccggccgacctgcggcgccgcgacgccgcgtga
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