Burkholderia semiarida: R0290_33005
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Entry
R0290_33005 CDS
T10421
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bser Burkholderia semiarida
Pathway
bser03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R0290_33005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bser03400
]
R0290_33005
Enzymes [BR:
bser01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
R0290_33005
DNA repair and recombination proteins [BR:
bser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R0290_33005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XCV64585
LinkDB
All DBs
Position
3:999626..1000297
Genome browser
AA seq
223 aa
AA seq
DB search
MTRKPPARPASTPPPTDDDTPATLGACRRCTLWEHATQPVPGAGPVDAPIMLVGEQPGDQ
EDRAGLPFVGAAGRMLDRALDEAGIERSHVYLTNAVKHFKWEPRGKRRLHKTPAQREVAA
CHYWLERELEAVQPRVVVALGATALRAVLQDNDATLERTRAPVRTEDGRLVVATYHPSYV
LRTRGADSREHAYRTLVDALRTASRLARERRHGGGRPSHGDAG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcaaaccgcccgcgcgcccggcatccacgccgccgccgaccgacgacgatacg
ccggccacgctcggcgcgtgccgccgctgcacgctgtgggaacacgcgacgcagcccgtg
ccgggcgccgggcccgtcgacgcgccgatcatgctggtcggcgagcagccgggcgaccag
gaggaccgcgcgggcctgccgttcgtcggcgcggccggccgcatgctcgatcgcgcactc
gacgaagccgggatcgaacgctcgcacgtctacctgacgaatgcggtcaagcacttcaaa
tgggagccgcgcggcaagcggcggctgcacaagacgcccgcgcagcgcgaagtggccgcg
tgccactactggctcgagcgcgagctcgaagccgtacagccgcgcgtggtggtcgcgctc
ggcgcgacggcgctgcgcgcggtgctgcaggacaacgacgcgacgctcgagcgcacgcgc
gcgccggtgcgcaccgaggacggccggctcgtcgtcgccacctatcatccgtcgtacgtg
ctgcgcacgcgcggcgccgattcccgcgaacacgcctaccgcacactggtggacgcattg
cgcacggcgtcgcgcctcgcgcgcgagcggcgccacggcggcggccgtccgtcgcacggg
gacgccggatga
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