Brucella suis bv. 1: BSS2_I0807
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Entry
BSS2_I0807 CDS
T03181
Symbol
dnaE
Name
(GenBank) dnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bsf
Brucella suis bv. 1
Pathway
bsf03030
DNA replication
bsf03430
Mismatch repair
bsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSS2_I0807 (dnaE)
03430 Mismatch repair
BSS2_I0807 (dnaE)
03440 Homologous recombination
BSS2_I0807 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsf03032
]
BSS2_I0807 (dnaE)
03400 DNA repair and recombination proteins [BR:
bsf03400
]
BSS2_I0807 (dnaE)
Enzymes [BR:
bsf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSS2_I0807 (dnaE)
DNA replication proteins [BR:
bsf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSS2_I0807 (dnaE)
DNA repair and recombination proteins [BR:
bsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSS2_I0807 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AHN46463
LinkDB
All DBs
Position
I:802335..805826
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AA seq
1163 aa
AA seq
DB search
MNDTVAGNAASGSSATPGFVHLRVHSAYSLLEGALPLGKIIKQALADEAPAIAVTDTNNL
FGALEFAQKASKDGVQPIIGCQLDVAFGDHNDNSRSVNRKLALDLAPLVLIAATEAGYAN
IVRLVSRAFLDTPAGDPIHIEAGWLPALSEDVIALTGGPLGPIGRSFTADRADRARARLA
FLKETFGNRLYVELQRQAGYDRTVEASTVELAYEMDLPLVATNEAFFLKAEDFEAHDALL
AIAEGQILSNDDRRRLTPDHCLKSRAEMAELFADLPEALENTVEIAGRCSWYTQTRKPIL
PRFTGESDDPEAAVQAEADELARQAREGLKKRLETAGLAEGYTPEQYAERLEYEIGIITR
MKFPGYFLIVADFIKWAKAHGIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNP
DRVSMPDFDIDFCQDRREEVIRYVQEKYGRDQVAQIITFGTLQARAVLRDVGRVLEMPYG
QVDRLCKLVPQNPANPVSLAQAIESEPKINEEREKEPVVGRLLDMALKLEGLYRHASTHA
AGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLQTAVKLV
ARKGIDIDLSHLPLDDALTYEMLSRGETVGVFQVESAGMRKALLGMKPDRVEDIIALVAL
YRPGPMENIPTYNARKNGEEEIASIHPKIDHLIKETQGVIVYQEQVMQIAQVLSGYSLGE
ADLLRRAMGKKIREEMDKQRVRFVDGAVERGVDKAQANMIFDLLAKFADYGFNKSHAAAY
AIVSYQTAYIKAHYPVEFLAASMTYDMSNTDKLNDFRREANRLGIEVVPPSVKTSFRPFE
VGEKKIFYSLAAIKGVGEAAVDHIVDVRAEKQFESLEDFCERIDPKIINRRVLESLINAG
AMDCFGRDRAAMCAGMDRILGFAQRTQENAVSGQSDIFGLSGAPRETLILPPTAPWLPSE
MLHREFQAVGFYLSAHPLDEYRDVLNRMRVQSWADFSAAVKRGASAGRLAGTVTARQERK
TRTGNKMGIVQLSDASGQFEAVLFSEGLAQYRDLLESGKSVVITVQAENRPEGIGLRIQT
VQSLEDEACRMQKAMRLYLRSADAVRHIAPHFNTRGDGQVSLIVIKDNGQREVEIELPHR
YRVSPQIASAMKAIQGVVEVELV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacggtagcaggaaacgcagcgagcggtagctctgctacgccgggtttcgtt
catctgcgggttcattccgcctattccttgctggaaggcgcattgccgcttggcaagatc
atcaaacaggcgcttgccgacgaagcgccggccatcgcagtcacggacaccaacaatctg
ttcggtgcgctggaatttgcgcagaaggcgtcgaaggatggtgtgcagccgattatcggc
tgtcagcttgatgttgccttcggcgatcataatgacaatagccgcagtgttaaccgcaag
ctcgcgctggatcttgcgccgcttgtcctgattgcggcaacggaagcaggctatgccaat
attgtgcggcttgtaagccgtgcatttctggatacgcctgctggcgaccctatccacata
gaggctggctggctgccagccttgtctgaggatgtaatcgcgctaaccggcggacctttg
gggccgatcgggcggtccttcacggcggatcgtgccgaccgcgcgcgcgcgcgcttggct
ttcctgaaggaaaccttcggcaatcgtctctatgtcgaattgcagcgccaggcggggtat
gaccgcactgtggaagccagtacggtggaactggcttacgagatggatttgccgctggtc
gcgaccaacgaggcttttttcctgaaagcggaggatttcgaggcgcatgatgcgctgctc
gccattgcggaaggccagattctctccaacgatgatcgccgccgcctgacaccggatcat
tgtctgaaaagccgcgcggaaatggcggagctttttgccgacctgccggaagcacttgag
aatacggtcgaaattgccgggcgttgtagttggtacacgcagacgcgtaagccgatcctg
ccacggtttaccggcgagtccgacgatccggaagctgccgttcaggcggaagctgacgaa
cttgcgcggcaggcgcgcgagggcctgaagaagcgtcttgagactgcgggccttgcggaa
ggctatacgccggaacaatatgccgaacgcctcgaatatgagatcggcatcatcacccgc
atgaagtttccgggctatttcctgatcgttgccgactttatcaaatgggccaaagctcat
ggtattccggtcgggccgggccgtggttccggtgccggttctcttgtcgcctatgcgctg
accatcaccgatgtcgatccgctgcgcttctcgctactttttgaacgctttctcaatccc
gatcgcgtttcgatgcccgacttcgatatcgatttctgtcaggatcgccgcgaagaggtg
atccgctatgtgcaggaaaaatacgggcgcgatcaggttgcacagatcatcacgtttgga
accttgcaggctcgcgccgtgctgcgtgacgttggccgtgttctggaaatgccatatggg
caggtggatcgcctctgcaagctggtgccgcagaacccggccaatccggtatcattggcg
caagccatcgagtccgagcctaagatcaacgaggagcgcgagaaggagccggtcgtcggc
cgccttctcgacatggcgctgaagcttgaagggctttaccggcatgcatcgacccatgcc
gctggcatcgtgatcggtgatcgacctttgtctgagctggtgccaatgtatcgcgatccg
cgatccgacatgcctgtcacccagttcaatatgaagtgggtggagcaggcgggtctcgtc
aagttcgacttcctcggcctcaagacgctgaccgttcttcaaacggcggtcaagctggtg
gcgcgcaaggggatcgatatcgatctttcccacctgccgcttgatgatgcgctgacctat
gaaatgctgtcgcgcggtgaaaccgttggtgtgttccaggttgaaagtgcgggtatgcgc
aaggcgctgctcggcatgaagccggatcgtgtcgaggatattattgcgcttgtcgcgctt
tatcgtccgggcccgatggagaacattccaacctataatgcgcgcaagaatggtgaggag
gagatcgcctccattcacccgaagatcgatcacctgatcaaggaaacgcagggcgtcatc
gtctatcaggaacaggtgatgcagatcgcgcaggtgctttcgggctattcgctcggcgaa
gctgaccttctgcgccgcgccatgggcaagaagatacgcgaggaaatggacaagcagcgt
gtccgtttcgtggatggtgcggttgagcgtggggtggacaaggcgcaggcgaacatgatt
ttcgatctgcttgccaagttcgccgactatggcttcaacaagtcgcacgctgcggcctat
gccatcgtttcttaccagacggcttatataaaggcgcattacccggtcgagttcctcgcc
gcgtcgatgacctacgatatgtcgaacaccgataagctcaacgatttccgccgcgaggcg
aaccgtctaggcattgaggttgtgccgccttcggtgaagacatcgttccgcccgtttgaa
gtgggtgagaagaagattttctattcgctcgcagccatcaagggtgtgggggaggcggct
gtcgatcatattgtcgatgtgcgtgccgaaaaacagtttgaaagccttgaggatttttgc
gagcggattgatcccaaaattatcaatcgccgtgttctggaaagcctcatcaatgcaggc
gcgatggattgttttgggcgggaccgcgctgccatgtgcgccgggatggaccgcattctg
ggctttgcccagcgcacgcaggaaaatgccgtcagcggccagtcggatattttcggcctt
tccggcgcgcccagggaaacacttatcctgccgccgacagccccctggctgccatctgaa
atgctgcatcgtgagtttcaggcggttggcttttatctgtctgcccatccgctggacgaa
tatcgcgacgtcttgaaccggatgcgtgtgcaaagctgggctgatttttcagccgcggta
aagcgcggcgcaagcgcggggcgtctggccgggacggttacggcccggcaggagcgcaag
acccgcaccggcaacaagatgggtatcgtgcagctttccgacgccagcggccagtttgag
gcggtcctgttttcggaagggctcgcacaatatcgcgatctgttggaaagcggcaaatcg
gtggtgatcacggtgcaggcggaaaaccggcctgaaggcatcggattgcgcattcagact
gtccagtcgctggaagacgaggcttgccgtatgcagaaggctatgcgactctatctgcgc
tcggctgatgcggtccgccacatcgcaccgcatttcaatacacgcggtgacggacaggtg
agcctcatcgtcatcaaggataacggacagcgtgaggtggagatcgaattgccgcatcgc
tatcgcgtcagcccgcagatcgcgagcgccatgaaggctatccagggcgttgtggaagtc
gagcttgtttag
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