Brucella suis ZW046: IY72_04960
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Entry
IY72_04960 CDS
T03427
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bsg
Brucella suis ZW046
Pathway
bsg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IY72_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsg03019
]
IY72_04960
Enzymes [BR:
bsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IY72_04960
Messenger RNA biogenesis [BR:
bsg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IY72_04960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AIN87324
UniProt:
A0AAI8E887
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All DBs
Position
1:993880..995487
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AA seq
535 aa
AA seq
DB search
MGRLIFIGFPGLGLVASHLPHRNGPAEEGTRNQFGHDSASRQRVFRRPVVIIKWNYVRQV
ALARRFKADRECAVPLKEIELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPS
QLEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTI
RNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMCDGLVDLSQTRWLVL
DEADRMLDMGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGT
TASEITQVVHPVPTKEKRRLLSAMLTDADMRSVIVFTRTKHGADAVVRHLERDRYDVAAI
HGNKSQNARQRALNGFRDGTLRILVATDIAARGIDVPGISHVVNYDLPDEPETYVHRIGR
TGRNGASGASITLYDPATEESKLRAVERVTRSKLSIKDAPVKLAPAPVAKGPAPQGQRTE
QAESRKAPAHKHRRPAQKAGEQHRAGAHASAGEAAPKPKRPFRRKRRSNGGQRAA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggccgactgattttcatcggctttcccggacttggacttgttgcgtcacatcttcca
caccggaatggtccggcagaggaagggacccgaaatcagttcgggcacgacagcgcaagt
cgccagagagttttccggcgtcccgtcgttatcattaaatggaattatgttcggcaagtt
gcgcttgcccggcgttttaaagcggaccgcgaatgcgcggtgccgctgaaagagattgaa
ttgacaaaagaaaacacgggcggcttcgccgctctcggtatcaccggcgttctgctcaaa
ggcgtggaagctgccggcatgaccgagccgaaaccgatccagacgcaagccatcccgtcg
caacttgaaggccaggacatcctcggcatcgcccagacgggttccggcaagacggcggct
ttcagcctgcccatccttcagaaaatcatcggccttggcgacaagcgccgcccgaaaacc
gcacgcgcgctgatcctggcgccaacgcgtgaactggcagtacagattgagcagacgatc
cgcaatgtctccaaaagcgcgcatatctccaccgcgttggttctcggcggcgtgtccaag
ctttcgcagatcaagcgtatcgcacccggcatcgatgtgctcatcgcaacacccggccgc
ctgacggacctgatgtgcgatggcctcgtggacctgtcgcagacccgctggctggttctc
gatgaagccgaccgcatgttggacatgggcttcatcaatgatgtgaagcgcattgccaag
gcaacacacgccgaacgccagaccgcactgttctcggctaccatgccaaaggagatcgca
tcgctggccgaacgtctgctgcgcgatccggtacgggtggaagtggcgccacaaggcacc
acggcttctgaaattacgcaggtcgtgcatccagtgccgacgaaggagaagcgccgcctg
ctttcagccatgctgaccgatgccgacatgcgttccgtcatcgtcttcacgcgcaccaag
cacggagcagatgccgtcgtgcgccatcttgagcgcgaccgctatgatgttgcggccatc
cacggcaataagtcgcagaatgcacgccagcgcgcgctgaacggtttccgcgatgggacc
ctgcgcattctggttgcaacggatattgcagcgcgcggcatcgacgtgcccggcatcagc
catgtggtgaattacgacctgccggacgagccggaaacctatgtgcaccgcatcggccgc
accggccgcaacggcgcaagcggcgcttccatcacgctttatgatccggctacggaagaa
tcaaagctgcgggcggttgagcgcgtcacgcggagcaaactttcgatcaaggatgcgccg
gtgaagcttgcaccagcacctgtcgccaaaggccccgcaccccagggccagcggactgaa
caggctgagagccgcaaggcgcccgcgcacaagcatcgccgccccgcacagaaggcgggc
gagcagcatcgcgccggggcacatgccagcgccggtgaggccgcgccgaagccgaagcgt
cccttccgccgcaagcgccgcagcaatggcggccagcgcgccgcctga
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