Bacillus subtilis subsp. subtilis 6051-HGW: BSU6051_01070
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Entry
BSU6051_01070 CDS
T02503
Symbol
rpoB
Name
(GenBank) RNA polymerase beta subunit RpoB
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bsh
Bacillus subtilis subsp. subtilis 6051-HGW
Pathway
bsh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSU6051_01070 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsh03021
]
BSU6051_01070 (rpoB)
03400 DNA repair and recombination proteins [BR:
bsh03400
]
BSU6051_01070 (rpoB)
Enzymes [BR:
bsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSU6051_01070 (rpoB)
Transcription machinery [BR:
bsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSU6051_01070 (rpoB)
DNA repair and recombination proteins [BR:
bsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSU6051_01070 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AGG59450
LinkDB
All DBs
Position
121919..125500
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQV
INVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRF
GFIETPYRRVDPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFRGEN
TVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGT
GMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSGDEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgctcgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcaccaattgaggatttcactggt
aacctctctcttgagttcattgattatagtttaggtgagcctaaatatcctgtagaggaa
tcaaaagaacgtgatgtgacttactcagctccgctaagagtgaaggttcgtttaattaac
aaagaaactggagaggtaaaagaccaagatgtcttcatgggtgatttccctattatgaca
gatacaggtacttttatcattaacggtgcggaacgtgttatcgtttcccagcttgttcgg
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttaccgca
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaagatgttgtt
tatgtccgcattgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcggctccgatcaagagattcttgatctcataggagaaaacgaatacctgcgaaatacg
cttgataaagataacacagaaaacagcgacaaagcgttgctggaaatttacgagcgtctc
cgtcctggagagccgcctacagtagaaaatgcgaaaagcttgcttgattctcgtttcttt
gatccgaaacgatacgatcttgccaatgtaggacgctataaaattaataaaaaacttcat
attaagaatcgcctcttcaatcagagacttgctgaaacgcttgttgatcctgaaacagga
gaaatccttgctgaaaaaggccagattcttgatagaagaacgcttgataaagtactgcca
tacttagaaaacggaatcggttttagaaagctgtatccgaatggcggcgttgttgaagat
gaagtgactcttcaatcaattaaaatctttgctccgactgatcaagaaggagaacaggtt
atcaatgtaatcggcaatgcttacatcgaagaagagattaaaaacatcacgcctgctgat
attatttcttcaatcagctacttcttcaacctgctgcacggagtaggcgacacagatgat
atcgatcatcttggaaaccgccgtttacgttctgtaggcgagcttctccagaaccaattc
cgtatcggtttaagccgtatggagcgtgtggttcgtgagagaatgtcaattcaagatacg
aatacaattacgcctcagcagctgatcaatattcgtcctgttattgcgtccattaaagag
ttctttggaagctcacagctttctcaattcatggatcagacgaacccgcttgctgaatta
acgcacaagcgtcgtctgtcagcattaggaccgggcggattgacacgtgagcgtgccgga
atggaagtgcgtgacgttcactactcccactatggccgtatgtgtccgattgaaacgcct
gagggcccgaacatcggtttgatcaactcactatcatcttatgcaaaagtaaaccgtttt
ggctttattgaaacgccatatcgccgcgttgaccctgaaacagggaaggtaacgggcaga
atcgattacttaactgctgatgaagaggataactatgttgtcgctcaagcgaatgctcgt
cttgatgacgaaggcgcctttattgatgacagcatcgtagctcgtttccgcggggagaac
accgttgtttccagaaatcgtgtagactacatggatgtatcgcctaagcaggttgtatct
gctgcgacagcatgtatcccgttcttagaaaacgatgactccaaccgtgccctcatggga
gcgaacatgcagcgtcaggctgtgcctttgatgcagccggaagcgccatttgttggaact
ggtatggaatacgtatcaggaaaagactctggtgccgctgttatttgtaaacaccctggt
atcgttgaacgcgtagaagccaaaaacgtttgggttcgccgttatgaagaagtagacggt
caaaaagtaaaaggaaacctggataaatacagcctgctgaaatttgtccgctctaaccaa
ggtacgtgctacaaccagcgtccgatcgtaagtgtcggcgatgaagtggtaaaaggagaa
atccttgctgacggtccttctatggagcttggtgaacttgcacttggccgtaacgtaatg
gtcggcttcatgacgtgggatggctacaactatgaggatgccatcatcatgagtgaacgc
ctagtgaaggatgatgtttatacatctatccacattgaagaatacgaatcagaagcacgt
gatacgaaacttggacctgaagaaatcactcgcgatattccaaacgtcggtgaagatgcg
cttcgcaatcttgatgaccgcggaatcatccgtattggggcagaagtaaaagacggagat
cttcttgttggtaaagtaacgcctaaaggcgtaactgaactgactgccgaagaacgcctt
cttcacgccatctttggcgagaaagcccgcgaggttcgtgatacttctcttcgtgtgcct
catggcggcggcggaattatccatgacgttaaagtcttcaaccgtgaagacggagacgaa
cttcctccaggtgttaaccagttagtacgcgtatatatcgttcagaaacgtaagatttct
gaaggggataaaatggccggtcgtcacggtaacaaaggtgttatctctaagattcttcct
gaagaggatatgccttaccttcctgacggcacaccaattgatatcatgcttaacccgctg
ggcgtaccatcacgtatgaacatcgggcaggtattggaacttcacatgggtatggccgct
cgttaccttggcattcacattgcatctcctgtatttgacggagcgcgagaagaggatgtc
tgggaaacacttgaagaagccggcatgtctcgtgacgccaaaacagtgctttacgacgga
cgtactggagagccgtttgataaccgtgtatctgtcggtatcatgtacatgatcaaactg
gctcacatggttgacgataaacttcatgcacgctctacaggcccttactcacttgttacg
cagcagcctcttggcggtaaagcgcaatttggcggacagcgttttggtgagatggaggtt
tgggcacttgaagcttacggtgcggcttacactcttcaagaaattctgactgttaagtct
gatgacgtggttggacgtgtgaaaacatacgaagccatcgttaaaggcgacaatgttcct
gaaccaggtgttccggaatcattcaaagtattaatcaaagaacttcaaagcttaggtatg
gatgtcaaaatcctttctggtgatgaagaagaaatagaaatgagagatttagaagacgaa
gaagatgcgaaacaagctgacggcctggcattatcaggtgatgaagagccggaagaaaca
gcatctgcagacgttgaacgcgatgtagtaacaaaagaataa
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integrated database retrieval system
