Bacillus subtilis subsp. subtilis 6051-HGW: BSU6051_22880
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Entry
BSU6051_22880 CDS
T02503
Symbol
ypfD
Name
(GenBank) RNA degradation presenting factor YpfD
KO
K02945
small subunit ribosomal protein S1
Organism
bsh
Bacillus subtilis subsp. subtilis 6051-HGW
Pathway
bsh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bsh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BSU6051_22880 (ypfD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bsh03011
]
BSU6051_22880 (ypfD)
Ribosome [BR:
bsh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BSU6051_22880 (ypfD)
Bacteria
BSU6051_22880 (ypfD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
EXOSC1
S1_2
S1_RRP4
Xylo_C
Glyco_transf_20
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AGG61685
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Position
complement(2394666..2395814)
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AA seq
382 aa
AA seq
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MTEEMNQIDVQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVEKASDV
VKVDDELDLKVTKVEDDALILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVVKGGLVVD
IGVRGFIPASLVEAHFVEDFTDYKGKTLSLLVVELDRDKNRVILSHRAVVESEQANKKQE
LLQSLEVGSVLDGKVQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQEVKVK
VLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEILPGVEGLV
HISQISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEETPKADQEDYRQYQA
KEETSTGFQLGDLIGDKLNKLK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggaaatgaatcaaattgatgttcaagtgccagaggttggagatgtagttaaa
gggattgtgacaaaggtagaagacaaacatgtagatgtagaaattatcaatgtcaaacaa
tccggtattattccaatcagtgaattatcaagtcttcatgtagagaaagcatcggatgtt
gttaaagtagacgacgagcttgacctgaaagtaacaaaagtggaagacgatgctttgatt
ttatctaaacgtgctgttgatgcagaccgcgcttgggaagaccttgagaaaaaatttgaa
acaaaagaagtgtttgaagctgaagtgaaagatgtcgtgaaaggcggccttgtcgttgat
atcggcgttcgcggttttattccggcatcacttgttgaagcacatttcgttgaagacttc
actgactataaaggaaaaacactgtcactgctcgttgtagagcttgaccgtgataaaaac
cgcgtgatcctttcacaccgtgctgttgttgaaagtgaacaagcgaataaaaaacaagaa
cttcttcagtctcttgaagttggaagtgtacttgatggcaaagtacagcgcctgactgac
tttggcgcgtttgttgatattggcggcatcgacggacttgtacacatttcacagctttcc
cactctcatgtagagaagccgtctgacgttgttgaagagggacaagaagtaaaagtgaaa
gtgttatcggttgaccgtgataatgaacgtatttctttatcgatcaaagatacactgcct
ggaccttggaaccaaatcggcgaaaaagtgaagcctggcgatgtgcttgaaggaactgta
cagcgtcttgtaagcttcggtgcctttgttgaaatccttccaggtgttgaaggtctcgtt
catatttctcaaatttccaataaacacatcggcacgccgcatgaagtccttgaagaagga
cagactgtaaaagtgaaggttcttgatgtgaatgaaaatgaggagcgcatttcattaagc
atgcgtgaacttgaagaaacgcctaaagctgaccaggaagattaccgtcaatatcaagcg
aaggaagaaacaagcactggcttccagcttggagatctgatcggagataagctgaataaa
ctaaaataa
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