Bacillus shivajii: LGQ02_06005
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Entry
LGQ02_06005 CDS
T07881
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bshi
Bacillus shivajii
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bshi03019
]
LGQ02_06005 (yhaM)
Messenger RNA biogenesis [BR:
bshi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LGQ02_06005 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
PMC2NT
Motif
Other DBs
NCBI-ProteinID:
UCZ54315
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All DBs
Position
1244259..1245218
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AA seq
319 aa
AA seq
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MKKGINFLQVGDQVDHYLLIKSAKKGIASNGKPFLTLQMSDKTGEIEAKLWAISPEDEAT
FKSSIVVHTEGEIQDFRGMRQLKIKAIRPTTSMDQVSMRDFMPSAPRDPAEMVEQITQYI
FEMKNPKIQRITRHLFKKHQKAFTEYPAATKNHHEFVSGLAYHVVCMLDLSKSIAALYPS
LDKDLLYAGVILHDLGKVKELSGPLDAQYTIEGKLLGHISIMVTEVEEAANELDIQGEEV
LVLKHLILSHHGKEEWGSPKRPIIKEAEMLHMIDNIDAKMNMMDRTLERVMPGEFSERIF
PMENRSFYKPSFHDDPLDI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaagggattaacttcctacaagtaggtgatcaagtcgatcattatttactaatt
aaatctgctaaaaagggtattgccagtaatggcaagccatttcttacgttacaaatgtca
gataaaactggagaaatagaagcaaaattgtgggcgatttccccggaagatgaagcgact
tttaaaagctctattgtcgttcatacagaaggagaaattcaagattttcgtggaatgaga
cagttaaaaattaaagcaattcgtccaacgacaagcatggatcaagtttcgatgagggat
tttatgccatcagcgccacgagacccagctgaaatggtagaacaaataacgcaatacatt
tttgaaatgaaaaatccaaagatccaacgtattactcgtcatttatttaaaaaacatcaa
aaagcatttacagaatacccagcagcaacaaaaaaccatcatgagtttgtatctggttta
gcctatcatgttgtatgtatgctggatttatcaaaaagtattgcagcattatacccttcg
ctagataaagatttactttatgcaggtgtgatcttgcatgatttagggaaagtgaaagaa
ttatctggtccattagatgctcaatatacgatcgaaggaaagctactaggacatatttca
attatggtgacagaagtagaggaagcagcgaatgaactagatatacaaggagaagaagtt
cttgttttgaaacatcttattttatctcatcatggtaaagaagaatggggtagtccgaag
cggccaattataaaagaagctgaaatgttacatatgattgataatattgatgcaaaaatg
aatatgatggatcgcacacttgaaagggtaatgccgggagaatttagtgaacgaattttc
ccgatggaaaatcgttcattttataaaccgtcctttcacgatgacccactagatatatag
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