Bacillus shivajii: LGQ02_06265
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Entry
LGQ02_06265 CDS
T07881
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bshi
Bacillus shivajii
Pathway
bshi03410
Base excision repair
bshi03430
Mismatch repair
bshi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGQ02_06265 (recJ)
03430 Mismatch repair
LGQ02_06265 (recJ)
03440 Homologous recombination
LGQ02_06265 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bshi03400
]
LGQ02_06265 (recJ)
DNA repair and recombination proteins [BR:
bshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LGQ02_06265 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LGQ02_06265 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LGQ02_06265 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UCZ54363
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Position
1296661..1298997
Genome browser
AA seq
778 aa
AA seq
DB search
MLQSNARWKINKPDEQLVKQLAEQLGVSMIAARFLIQRNFTKAEEANAFLHIDKNKLHDP
FEMKDMEKGIDRMKRAIDNNEKILIFGDYDADGVTSTSLMYLTLKQLGAQVGFYVPNRFT
EGYGPNENAFRHAHEEGITLIITVDTGISAVHEANVAKDLGMDLIITDHHEPPPEIPQGY
AVINPKREDCPYPNKNLAGVGVAFKFAEALLGELPEQFLDLVALGTVADLVPLVDENRYF
VTKGVRNLSRNQRPGLKALMAQCGIEPEEMSEEQVGFMIGPRLNAAGRLDSADPAIHLLT
SEDPYEAEEIALMIDDLNKERQKIVSDMTKEAEKQVEESGIPPVIIVGQEGWNAGVIGIV
ASRLVEKYYRPTIVLSLDSEKGLAKGSARSIEGFDMFQSLSQCREWLPHFGGHPMAAGLT
MEIEHVEPLHEKLIQIAEETLTEEDWIRSLHVDLPVQLHEVTIEAINDLKTMAPFGVGNP
APKILIEEVEIDTCKKIGAKQDHLKITFKKENQQLDGIGFRMGDKHDALSPLAKASVVGQ
LSINEWNGHSKPQIILEDMKVDGWQLFDLRGDHQSIKTISHLPADEVTFVVFREKSMEAV
HIDNNWDVYKVYSDETILNKSRKYIVLYDLPESIRDLENVLESMQEPHRIYACFQHDESS
FFETLPTREQFKWLYAFLRKRGSFDMKKHGADLAKHKNWSEKSIHFMCKVFFDLEFVKIN
NGLITVEEHPQKKDLVNSPTYQRRIEQSELENELLYSSYRSLKKQLEDAMNDKALSFA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgctacaatcaaatgcacgatggaaaataaacaaaccagatgagcaactcgtgaaacaa
ttagcagaacaactaggtgtttctatgattgctgctcgttttttaattcagcgaaatttt
acaaaagcagaagaagctaatgcttttttacatattgataaaaacaagttgcatgatccg
tttgaaatgaaagatatggaaaaaggcattgacagaatgaaaagagcaatcgataacaat
gaaaaaatcctcatattcggtgattatgatgctgatggcgttacaagtacgtcacttatg
tatttaacgttgaaacaattaggagctcaagttggcttttacgttccaaaccgatttact
gaaggatatggaccgaatgaaaatgcatttcgccatgcacatgaagaaggcataacatta
atcataacagttgatacaggaatttcagctgttcatgaagccaatgtggcaaaagattta
gggatggatttaatcattactgatcaccatgagccaccaccagaaataccacaaggatat
gctgttattaatccgaaacgtgaagactgtccttatccgaataaaaatttagcaggtgta
ggggtcgcatttaagtttgctgaagcgttgttaggtgaacttccagaacaatttttggat
ttggttgccttaggtaccgttgcggaccttgtcccgttagttgatgaaaatcgttatttt
gtaacgaaaggggtacgtaatctatctaggaatcagcgtcctggtttaaaagcattaatg
gctcagtgtggcattgaaccagaagaaatgagtgaagaacaggtcggttttatgatcgga
cctcgattaaatgcagctggccgtctagattcggctgaccctgccattcacttattaacg
agtgaggacccttatgaagctgaagaaatcgcactaatgattgatgacttgaataaagaa
cggcaaaaaattgttagcgatatgacaaaagaagccgaaaaacaagttgaagaaagtggg
attcctccagttattatcgttggacaagaaggttggaacgcaggggttatcggcattgtt
gcaagtagacttgtcgagaagtattaccgacctacaattgtccttagccttgactcagaa
aaaggactagcgaaaggatctgcacgtagcatcgaagggtttgatatgtttcaatctctc
tctcaatgtcgagagtggctcccgcattttggtggacatccaatggctgcaggtcttacg
atggaaattgagcatgttgaaccgttgcatgaaaagttgattcaaattgcagaagaaacg
ttgactgaagaagattggattcggtcacttcatgtagacttacccgttcaacttcatgaa
gtaacaattgaagcgattaatgatttaaagacgatggcaccttttggggtaggaaaccct
gcaccgaagatcctaatagaggaagttgaaatcgatacgtgtaaaaaaatcggagccaaa
caagatcatctaaaaatcacctttaaaaaagaaaaccaacaattggatggtattggcttt
agaatgggtgataaacatgatgctctttccccattagcaaaagcttcagttgtaggacaa
ctatcgattaatgaatggaatgggcatagtaaaccccaaattattttagaagatatgaaa
gtggacgggtggcaactattcgatttgcgtggtgatcatcaatccataaagacaattagt
cacttgccagcagatgaagtaacgtttgtcgtctttcgcgaaaaaagtatggaagctgtt
catatagataataactgggatgtttataaagtgtattcggacgaaacaatactaaataag
tctagaaaatacatcgttctatacgatttaccggaatcaatacgtgatttagaaaatgta
cttgagtcaatgcaagaacctcaccgcatttatgcatgttttcagcatgatgaaagttca
ttttttgaaacactgccaactcgtgaacaatttaaatggctttatgcatttttgagaaaa
cgaggctcgtttgatatgaaaaaacatggcgctgacttagcaaagcataaaaattggtcc
gaaaaatcaattcattttatgtgtaaggtgttttttgacttggaatttgttaaaataaac
aatggacttattaccgtcgaagaacatccacaaaaaaaggacttagtgaattcgccgact
tatcaaagacggatcgaacagagcgaattagaaaacgagctactttactcatcatatcgt
tctctaaaaaaacaattagaagatgcgatgaatgacaaagcattgtcatttgcgtaa
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