Bacillus shivajii: LGQ02_07105
Help
Entry
LGQ02_07105 CDS
T07881
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bshi
Bacillus shivajii
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bshi03019
]
LGQ02_07105
03009 Ribosome biogenesis [BR:
bshi03009
]
LGQ02_07105
Enzymes [BR:
bshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LGQ02_07105
Messenger RNA biogenesis [BR:
bshi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LGQ02_07105
Ribosome biogenesis [BR:
bshi03009
]
Prokaryotic type
rRNA helicases
LGQ02_07105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SLFN-g3_helicase
Helicase_RecD
PhoH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UCZ54523
LinkDB
All DBs
Position
1467173..1468465
Genome browser
AA seq
430 aa
AA seq
DB search
MSHNFERFQLSSYLIDALTNQNISLPTEIQERLIPAIKNGKDVIGQSQTGTGKTLAFLLP
VLDNIDVNSRETQAVITAPTRELANQLYEELKKLTDASDEVKSQLVTGGTDRLRMIEKLK
QRPHIVVGTPGRIADMIKEKALAVHHVRTFVVDEADQMLDMGFIEDVDRAAAHMGDELQM
LVFSATIPEKLQPFLKKYLSNPRHVHVQPKETSPKKIEHWLIPDRDRDRKELLKNIVKNV
NPFLAVIFVNKKETADEVYEALVEEGLNVDRLHGGISPRERKKVMKRLQAAEVQYLVASD
LVARGIDVKGISHIINYEIPKELEYYVHRVGRTARAGWDGIALTLYGRNDEMSIDKLEKQ
GINFKLKELKKGEWVDLERRKRQPKKTKIENHGKALPKPKKVKPGYKKKARYEQEQRDRR
QHKMERRRKK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcacataactttgaacgatttcaattatcttcatatttgattgatgcattaacaaat
caaaatatatctttgccgacagaaattcaggaacgtttgatccctgcaattaaaaatggt
aaggatgttattggccaatcacaaactggtacaggtaaaacgttagcctttttattacct
gtgttagataatattgatgtaaatagtcgagaaactcaagcagttattacagctccaaca
agagagttagccaaccagttatatgaggaattaaaaaagttaacagatgcttccgatgaa
gtgaaatcacaacttgtaacgggtggaacggatcgacttagaatgatcgaaaagcttaag
caacgtccacatatcgtggtaggaacaccaggaagaattgcggatatgattaaagagaaa
gcattagctgttcaccatgtgcgtacatttgtggtcgatgaagctgaccaaatgcttgat
atgggattcattgaagatgttgatcgtgcagcagctcatatgggtgatgagttacaaatg
ctcgtattctctgcgacgattcctgaaaaacttcagccgtttctaaaaaaatatttatca
aatcctcgtcacgttcatgttcaacctaaagaaacatcaccaaaaaaaattgagcactgg
ctaatcccagaccgtgaccgtgacagaaaagaattattaaaaaatatcgtcaaaaacgta
aatccgtttttagccgttatttttgtaaataagaaagaaacagctgatgaagtatatgag
gctcttgtcgaggaagggttaaatgtcgatcgtcttcacggagggatcagtcctcgtgaa
cgtaaaaaagtcatgaaacgtcttcaagctgctgaagtgcaatatttagttgcatcagac
cttgttgcgcgagggattgatgtgaaagggattagtcatattatcaattatgaaattccg
aaagagcttgaatattatgttcaccgtgttggccgaaccgctagagcaggatgggacggt
attgcattaacgttatatggacgaaacgacgagatgtcaattgataagctagaaaaacaa
ggaatcaattttaaattgaaagaattgaaaaaaggtgaatgggtcgaccttgagcgtaga
aaacgtcaaccgaaaaagacgaagattgaaaatcatggaaaagctttacctaagccaaag
aaagtaaaacctggatataagaaaaaagctcgctatgagcaagaacaaagagatagacgt
caacacaaaatggaacgaagaagaaaaaaataa
DBGET
integrated database retrieval system
