Bacillus shivajii: LGQ02_08325
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Entry
LGQ02_08325 CDS
T07881
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bshi
Bacillus shivajii
Pathway
bshi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGQ02_08325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bshi03019
]
LGQ02_08325
03400 DNA repair and recombination proteins [BR:
bshi03400
]
LGQ02_08325
Enzymes [BR:
bshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGQ02_08325
Messenger RNA biogenesis [BR:
bshi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LGQ02_08325
DNA repair and recombination proteins [BR:
bshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LGQ02_08325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
DUF1940
Motif
Other DBs
NCBI-ProteinID:
UCZ54736
LinkDB
All DBs
Position
1708165..1709697
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AA seq
510 aa
AA seq
DB search
MNLEEILYKKFGYKSFRKGQQAVIKEILRGKDVLGILPTGTGKTLCYQLPSLLLSGMTVV
VSPLLSLMEDQVHQLRASGDKRVVQLNSLLSFAERKETLHNLQDDALVFISPEMLSNEYV
LQVLSRYKISLIAIDEAHCISQWGHEFRTDYLRLREVIKKLNSPQCVALTATATKKVAVD
IIEHLGMNNPAIHRHSVNRPEISIIMDHGENVKEKDNKLMNWVNVLKKPGIIYVGTRNEA
ERMNNILKDSYGRKIAYYHAGLTKEDRLLVQRQFLNDELDWIVATNAFGMGINKSNVCSV
IHMYMPSSIEQYVQEIGRAGRGGQNSTAVSILSIEDRFLPISFIEREFPTENELNTWFYK
GYGSLLADREYVNVEEIKEVFQIDDTLWRMIQYYLEQESIVKDNMINTDNLTTEVLSDLN
ERFAKRSSEKLERLAQYERFTNTDGCLRQYLLHYFGESTSEQKICCSNCNTKKELINDEN
IDRDVYVPIEKQDFHYSIWEKELENIFLTP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgaagagattctttataaaaagtttggttataagtcatttcgcaaagggcaa
caagcagtaattaaagaaattcttcgtggaaaagatgttttaggaattttaccaacagga
acagggaaaacgttatgttaccaacttccttcgttgttgttaagtgggatgactgtagtt
gtgtcgccattactatcattgatggaagatcaagttcatcaattaagagcatctggagat
aaaagagttgttcaactaaacagccttttatcctttgcagaacgcaaagaaacattacat
aacttacaagatgatgcattagtttttatttcaccagaaatgttatcaaatgaatatgtc
cttcaagttttatcaaggtataagataagtctcattgcaattgatgaagcacactgtatc
tcacaatgggggcatgaatttagaacagactatttacgtctaagagaagtcataaaaaag
cttaacagcccgcaatgtgttgctttaacggcaactgccactaaaaaggtcgcagtagat
attattgagcatttaggaatgaacaaccctgctattcatcgacattcagtgaacagacct
gagattagcataattatggaccatggagaaaatgtaaaagaaaaagataacaagttaatg
aattgggtgaatgtcttaaagaaaccagggatcatctatgtagggacgagaaatgaagca
gaaagaatgaataacatacttaaggattcatatgggagaaaaatagcttattatcacgca
ggtttaacgaaagaagatcgactactcgttcaaagacagtttttaaatgatgaattagat
tggattgtggcgacgaacgcatttggtatgggaattaataaaagcaatgtctgttcggtt
attcacatgtacatgccatcttcgattgaacaatatgtacaagaaattggccgtgcagga
agagggggacaaaacagtacagctgtatctattttgtcgatcgaggaccgttttttgccg
attagttttattgaacgtgaatttcctactgaaaatgaactaaacacgtggttctataaa
gggtatggcagcttattagctgatcgagagtatgtcaatgttgaagaaatcaaagaagtc
tttcaaatcgatgatacgctatggcgaatgatacaatattatttagaacaggaatcaatt
gtgaaggacaatatgattaacactgacaatttaacaactgaagttctatctgatttaaac
gaaaggtttgctaaaagatcaagtgagaagctagaacggcttgcgcaatatgaacgtttc
actaacactgatggctgtctcaggcagtatttgttgcattattttggggaaagcacttcc
gagcaaaagatttgttgctcgaactgtaatacaaaaaaagagcttataaatgatgaaaac
atcgatcgtgacgtgtacgtaccaatagaaaagcaagatttccattattctatatgggaa
aaagaacttgaaaatatatttttaacaccttga
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