Bacillus shivajii: LGQ02_10530
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Entry
LGQ02_10530 CDS
T07881
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bshi
Bacillus shivajii
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bshi03400
]
LGQ02_10530 (addB)
Enzymes [BR:
bshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGQ02_10530 (addB)
DNA repair and recombination proteins [BR:
bshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LGQ02_10530 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UCZ55121
LinkDB
All DBs
Position
2127474..2130983
Genome browser
AA seq
1169 aa
AA seq
DB search
MAITFYIGRSGTGKSTHIQQDMINKLKSQPTGNPIIYLVPDQMTFQTEMNFIQSDIQGMT
RAQVFSFSRLALRVLQETGGISRHHLQRTGLHMLIRKIVEKEKDKFSVFKRSTETNGFID
ELEQIVTEFKRYDVKTETLDHYEKTLREKEERSPQEAVLLDKLHDVKIVFENLEYELADQ
YVGTEDYLALLAEQIPKSTYLQNAEVYIDGFYSFTPLELNVLQELLAHTAEVNVVLTLDK
HYDTDELVHELDLFHETGNTYQQLSFIAKEQGVQMNEPVSFSETKRFKTEGLKHLEKYGE
VRPPVPCEENDGIEMIAAVHKRAEVEGVAREILNLVRNEGYQFKDVAVLLRNMESYGDLI
ETVCRDYSIPIFMDKKRSMLNHPVIELIRSALDIIDRNWRYEDVFRCFKTDLLFPLNEEI
YEMRERVDQLENYVLSYGIQGARWYQKEPWTYQRVRTTAEGERKRSKYEEAFEREINDLK
TMLTAPLIQLAKRMKTAKTSRDRCTVIYQFLEDCDVPKKLEWLRDQAIKTHDLERAREHD
QVWNAVIELLDQMVELTGEEQVSFSLFRKLVETGVESMKFSIIPPALDQVIVADMEHSRL
SDVKVAFILGVNEGVLPAKPEEGGIVSEEERELLGSEGLQLAPGSTRQLLNESFIIYLAQ
STPSDLLYFTYPLADEEGRSMQPSILLKRIKDLFPNLEEKLWFNEPVEVPFEEQSNFVQN
PAVTLSYLTYQLQSWKKGYEIPDFWWGVYNWFVEHPTWRKETEYVLKSLFYENKAKPLPK
ETSRAIYGDEIKTSVSRIEKFQGCPFSQFASHGLKLQERESYKLEAPDIGTLFHAALKEM
AEHLKNEGRDFAQLTKNECTTLSKQIVDQLAPKIQREILLSSNRYSYIKQKLEEVVARAS
SILAEQSKASGFSPVGLEVGFGPKEDLPPLTFTLDNGVKMELIGRIDRVDKSQTDHGLML
RIIDYKSSKKDIKLMDVYYGLAIQMLIYLDVVLSHSDEWLGQKASPAGVLYFHVHNPLIQ
SNKPLSIEQLEEEIFKQFKMKGLLPADPEIIREMDTTLEQGVSNIIPAGLKKDGSLHSRS
SVISEADYEVVRNYLRKQVEQVGTALTEGKIDITPVKNKQQVACTFCPYGSFCQFDPTIE
TNEYNTLNKLEPDDILQKMREEGGDSDER
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcacattttatattggccggtccggtaccggtaaatcaacgcatatacaacaa
gacatgatcaataaattaaaatcgcaaccgactggaaacccaattatttatttagtccca
gaccaaatgacgttccaaacggaaatgaactttattcaatcagacatacaagggatgaca
cgtgctcaagtgtttagtttttcaaggcttgctctcagagttcttcaagaaactggcggg
atctcgagacaccacttgcaacgcaccggcttacatatgctcattcgaaaaatcgtggaa
aaagaaaaggacaagttctctgttttcaaacgatcaacagaaacaaatggttttatcgat
gagttagagcaaatcgtgactgaatttaaacgttacgatgtaaaaactgagacgctcgat
cactacgagaagacccttcgtgaaaaagaagaacgctcccctcaagaagcggttcttctt
gataaacttcacgacgtaaaaatcgtgttcgaaaatcttgaatatgagttggccgatcaa
tacgtcggcacggaggattatttagcgctacttgctgaacaaattccaaaatcaacgtac
ttacaaaatgccgaagtatatatcgatggcttttacagctttacaccgctcgaattaaac
gtgcttcaagagctccttgctcatacggcagaagtaaacgtcgttttaacgctcgataaa
cattatgatacagatgaactcgttcacgagcttgacctttttcacgaaacgggcaacaca
tatcagcaactttcgtttatcgcaaaagaacaaggcgttcaaatgaacgagcctgtcagc
ttctcagaaacaaaacgattcaaaactgaaggcctaaaacatttagaaaaatacggggaa
gtccgtccaccagttccttgtgaagaaaacgacggcattgaaatgatcgctgccgttcat
aagcgagcagaagttgaaggcgtcgcacgtgaaattttaaacctcgttcgaaatgaaggg
tatcaatttaaagacgtggcagtcttacttcggaacatggaaagctacggagatttaatt
gaaacggtttgtcgtgactattcgatcccaatttttatggataaaaaacgatcaatgtta
aatcatccggtgatcgagctcatccgttcagcgctcgatattatcgaccgaaactggcgt
tatgaagatgtgttccgttgttttaaaacggacttgctcttcccgttaaatgaagaaatt
tatgaaatgagagagcgcgtcgaccaacttgaaaactacgtgctttcatatggcattcaa
ggtgcgagatggtaccaaaaagaaccgtggacgtaccagcgggttcgcacaacagctgaa
ggggaacgaaaacgaagcaaatatgaggaagcatttgaaagagagattaatgacctaaaa
acgatgttaactgctccgctcatacaattagcaaaacgaatgaaaacggcgaaaacgtca
cgtgatcgctgtacagttatttatcaatttctagaagattgtgacgtaccgaaaaagctt
gagtggcttcgtgatcaagcgattaaaacgcatgacttagaacgcgctagagagcacgat
caagtgtggaacgcggtcattgaactactcgatcaaatggttgagctgacgggtgaagag
caagtatcgttctcactttttagaaagcttgtagaaacaggtgttgaaagcatgaagttt
tcaattattccgccagccttagaccaagtgatcgtcgcagacatggagcattcacgttta
agtgatgtaaaagtagcgtttattttaggcgtcaatgaaggggttctcccagcgaaacct
gaagaaggtggaattgtttctgaagaagaacgagagctattaggaagcgaaggtctccaa
ctagcgccaggcagtacgcgccaactacttaatgaatcatttatcatttatttagcgcaa
tctacgccgtcagacctcttatactttacgtatccgttagcggatgaagaagggcgtagt
atgcagccgtcgatcttattaaaacgaatcaaagatcttttcccgaacttagaggaaaaa
ctttggtttaatgagcctgtcgaagttccgtttgaagagcaatcaaactttgtacaaaac
cctgcagtgacgttatcgtatttaacgtatcagcttcagtcgtggaaaaaaggctacgag
atccccgacttttggtggggcgtttataactggtttgtcgagcatccaacgtggcgaaaa
gaaacagagtacgtgttaaaaagcttgttttatgaaaacaaagcaaaaccactaccgaaa
gagacgagccgtgcgatttacggggatgaaattaaaacgagtgtctctcgtattgagaag
ttccaaggttgtccgttttcgcaatttgcaagccacggcttaaagcttcaagagcgtgaa
tcgtataaattagaagcacctgatatcgggacactcttccatgcagcattgaaagaaatg
gctgagcacttgaaaaatgagggaagagactttgcgcaattaacgaaaaacgagtgtacg
acactttcaaaacaaattgtcgatcaactcgcaccaaaaattcagcgtgaaatcttactg
agttcgaacagatattcgtacattaaacaaaaactcgaagaagtcgtcgctcgtgcgtca
tcgattttagcggagcaatcaaaagcatccggtttttcacccgttggtcttgaagtcggt
ttcggaccgaaagaagaccttccaccactgacgtttacgttagataacggtgtgaaaatg
gaattaatcggccgaattgaccgtgtcgataagtctcaaacggatcatggccttatgctg
cgcattattgattataaatcaagtaaaaaagacattaagcttatggacgtgtattacgga
ctggcgattcaaatgttgatttatttagacgttgttttatcccattccgatgaatggcta
gggcaaaaagcgtctccagccggtgttctctacttccatgtgcataatccgcttattcag
tcgaataagccgttatcgattgaacaacttgaagaagaaatttttaaacagtttaaaatg
aaagggttactgccagcagaccctgaaatcatacgagaaatggatacgacactcgagcaa
ggcgtttcaaatataattccagcaggactgaaaaaagacggaagtctccattcaagatcg
tctgtgatctctgaagcggattacgaagtcgttcgcaattatttacgaaaacaagtcgaa
caagtcggaacggctctcacagaagggaaaattgacattacccctgtgaaaaataaacag
caagtcgcttgtaccttctgtccgtacggatcgttctgtcaatttgatccgacgattgaa
acgaatgagtacaatacgttaaataaactagagccagacgatatattacaaaagatgaga
gaagaagggggagattcggatgaacgttaa
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