Bacillus shivajii: LGQ02_10540
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Entry
LGQ02_10540 CDS
T07881
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bshi
Bacillus shivajii
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bshi03400
]
LGQ02_10540
DNA repair and recombination proteins [BR:
bshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LGQ02_10540
Archaeal homologous recombinant proteins
LGQ02_10540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF6019
Ligase_CoA
Motif
Other DBs
NCBI-ProteinID:
UCZ55123
LinkDB
All DBs
Position
2134704..2135876
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AA seq
390 aa
AA seq
DB search
MRLLHTADWHIGRTLEGRDRLFEHEQFFDELQEIVEKEKVDAILMAGDVFDSVNPPAKAE
ELFYESVARLTDHGKRPIMVIAGNHDHPDRLQAARSLVKNQGVHILGYPTEQAVQIRPNG
SDQLLNIAALPYPSESRLKDRFTENADELEIREAYDERIQFIFSELTKDFSPNDVNVAMS
HIFVAGGSASESERPIEVGGAYTVRATNLPADVQYTALGHLHRPQNIKRAPTLARYSGSP
LAFSFSEAGYAKSVTLVDVEPGKEPVTEDIYLSSGRPLVRWKAKNGVSEVFKWMEEKRDH
NAWIELEVYMEDTPTMEDIHHIKKNYPGIVTIRPIFPDTQEMDHEEEKKHVPIDEMFNRF
YQRQTGGATPDEELVQLFLELVNENGGDQS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagactactgcatacagctgattggcatattgggcgaaccctcgaagggagggatcgc
cttttcgaacatgaacaattttttgatgagctacaagagattgtggaaaaagaaaaagtt
gatgcgattcttatggcaggagacgtatttgactcggtgaacccgcccgcaaaagctgaa
gaactattttacgaaagtgttgcaaggctcactgatcacgggaaacgtccgatcatggtt
attgcgggtaatcacgatcacccggatcgcttacaagcagcgaggtcactcgtgaaaaat
caaggtgtccatattctcggctatccgactgaacaagctgttcaaattagacctaatggc
agtgaccagcttctaaatatcgctgcacttccttatccatcggaatcaagattaaaagat
cgttttactgaaaatgcagatgagcttgaaattcgtgaagcgtatgatgagcggattcaa
tttattttttccgagcttaccaaagatttttcaccaaacgatgtgaatgttgcgatgagt
catatttttgttgctggtggaagtgcttctgaatcggagcgaccaattgaagttgggggc
gcttatacggtgagggcaacaaatctcccagccgacgtgcaatacacggcacttggacat
ttacaccgaccgcagaacattaagcgggcaccaaccttagcgcgatattctggttcgcca
cttgcgtttagtttttctgaagcaggttacgcaaagtcggtgacgctcgttgatgtggaa
ccgggaaaagagcctgttacagaagatatttatttatcatccgggaggccgctcgtcagg
tggaaagcgaaaaatggtgtgtctgaagtgtttaaatggatggaagaaaagcgtgatcac
aacgcatggattgagcttgaagtgtatatggaagacacgccgacgatggaagacattcat
catataaaaaagaattatcccgggattgtgacgattcgtccgatttttcctgatacacaa
gaaatggaccatgaagaagagaaaaaacacgtcccgatcgatgaaatgttcaatcgtttt
taccagcgtcagactggcggcgcaacgccagatgaagagctcgtgcaattgtttttagaa
ctcgtcaatgaaaatgggggtgatcagtcttga
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