Bacillus shivajii: LGQ02_12770
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Entry
LGQ02_12770 CDS
T07881
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bshi
Bacillus shivajii
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bshi03032
]
LGQ02_12770 (topA)
03400 DNA repair and recombination proteins [BR:
bshi03400
]
LGQ02_12770 (topA)
Enzymes [BR:
bshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LGQ02_12770 (topA)
DNA replication proteins [BR:
bshi03032
]
Prokaryotic type
DNA Topoisomerases
LGQ02_12770 (topA)
DNA repair and recombination proteins [BR:
bshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LGQ02_12770 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
DUF1684
Sir1
Motif
Other DBs
NCBI-ProteinID:
UCZ51734
LinkDB
All DBs
Position
complement(2614721..2616793)
Genome browser
AA seq
690 aa
AA seq
DB search
MSDYLVIVESPAKAKTIGKYLGKKYSVKASMGHVIDLPKSQMGVDVESDYTPKYITIRGK
GPILKELKAAAKKAKKVYLAADPDREGEAIAWHLAGSLNIDKRSKCRVVFNEITKQAIKD
SFKEPRTIDMSLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKMIIDREN
EIKNFEPEEYWSIEANFMKDGNPFEAKFVAVDNKKKDLKSQQDVNDVLQKLSGDDFEIKE
VKRKERKRNPVVPFTTSSLQQEAARKLNYRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRLSETAQQEAKEYIETNYGKEYYNPNKAKTKQNQKTQDAHEAIRPTSVMKDPKTVK
QYLSRDQLRLYKLIWERMVASQMAPAVMDTMSVDLDNNGVIFRANGSKLKFPGFMKVYIE
GNDDGKKEEDRLLPDMEKGESAKAEKIDPNQHFTQPPPRYTEARLVKTMEELGIGRPSTY
APTLDTIQRRGYVALEEKRFVPTELGEIVLELIQEFFPEILNVEFTAKMENDLDSIEEGN
ENWVQVIDTFYRDFEKRLKIAEEEMEEVEIKDEPAGEDCEKCGHEMVYKMGRFGKFMACS
NFPDCRNTKAIVKEIGVKCPTCNEGNIVERKSKKRRIFYGCDRYPDCEFISWDKPISRKC
PKCESMLVEKKSKKGVHVQCSSCDYKEEKN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattacttagtgatcgtggaatcgcccgctaaagcgaaaacaattggaaaatat
ttagggaagaaatattcagtaaaagcatctatgggacatgttattgacttgcctaaaagt
cagatgggtgtcgatgtagagtcagattacacgcctaaatatataacaattcgcggtaaa
gggccgatattaaaagaactaaaagcagcagctaaaaaagcaaagaaagtctatctcgct
gccgacccggatcgtgaaggggaagcaattgcatggcatttagccggtagcttaaatata
gataaacgctcaaaatgtcgtgttgtttttaatgagattacaaaacaagcaataaaagat
tcattcaaagaaccacgaacgattgatatgagtttagtggatgcacaacaagctcgtcgt
gttctagaccgcctcgttggttacaacattagtcctttattatggaagaaagtgaaaaaa
gggctgagtgctggtcgtgtacaatctgtcgctgtaaaaatgattattgatcgcgaaaat
gaaattaagaattttgaacctgaagaatattggtcaattgaagcaaactttatgaaagat
ggaaatccttttgaagctaagtttgtagctgttgataataaaaagaaagatttaaagtct
caacaagatgttaatgatgtattacaaaaactttcaggcgatgactttgaaataaaagaa
gttaaaaggaaagaaagaaaacgaaatcctgttgttccttttacaacgtcatcacttcaa
caagaagctgcaagaaagcttaattatcgtgcaaagaaaacgatgatgctcgcacaacaa
ctatacgaagggattgacctcggaaaagaaggaacggtcggtttaattacgtatatgaga
actgactcaacgaggctctctgaaacagcgcaacaagaagcgaaagaatatattgaaaca
aattatgggaaagaatattataacccaaataaagcgaagacgaagcagaatcaaaagaca
caagacgcccatgaggcaattcgtccaacttctgtaatgaaagatcccaaaacagtaaag
caatacttaagcagagatcaattgagactatataaactcatttgggagcgaatggttgca
agtcaaatggcacctgctgtcatggatacgatgtccgttgacttagacaacaatggtgtc
attttccgagcgaatgggtctaagttgaaattccctgggtttatgaaagtatatattgaa
gggaatgacgacgggaagaaagaagaagaccgccttctcccagacatggaaaaaggagag
tcagctaaagcggaaaaaattgatccaaaccagcactttactcaaccaccgccacgatac
actgaagcaaggttagtaaaaacaatggaagagcttggtattggtagaccttctacatac
gctccaacattggatacaatccaaagaagaggatatgtcgcacttgaagaaaaacgtttt
gtacctacagagctaggggaaatcgttttagagcttattcaagaattcttccctgaaatc
ttaaatgtagagttcacggcaaaaatggaaaatgatttagactcaattgaagaaggtaat
gaaaattgggttcaggttattgatacgttttatcgtgacttcgaaaaacgcctgaaaata
gcagaagaggaaatggaagaagtagaaattaaagatgaaccagctggagaagactgtgaa
aagtgcggccacgaaatggtttataagatgggacggtttggaaagttcatggcttgttct
aactttccggattgccgaaatacgaaagctattgttaaagaaatcggtgtaaagtgccct
acttgtaacgaaggaaacattgttgagcgtaaaagtaaaaagcgtcgaatcttttacggg
tgtgaccgttacccagactgcgagtttatttcatgggataaaccgatctcaaggaaatgt
ccaaagtgtgaaagtatgctagtcgagaagaaatcgaaaaaaggtgtacacgtccaatgt
tcatcttgtgattacaaagaagagaaaaattaa
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