Bacillus shivajii: LGQ02_13405
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Entry
LGQ02_13405 CDS
T07881
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bshi
Bacillus shivajii
Pathway
bshi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LGQ02_13405
09124 Replication and repair
03420 Nucleotide excision repair
LGQ02_13405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bshi03021
]
LGQ02_13405
03400 DNA repair and recombination proteins [BR:
bshi03400
]
LGQ02_13405
Enzymes [BR:
bshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGQ02_13405
Transcription machinery [BR:
bshi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LGQ02_13405
DNA repair and recombination proteins [BR:
bshi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LGQ02_13405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
Helicase_C_3
SNF2-rel_dom
DEAD
Tfb2
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UCZ51852
LinkDB
All DBs
Position
complement(2752047..2753705)
Genome browser
AA seq
552 aa
AA seq
DB search
MEQKPLYIQENGMVYFNTAHREAKIVQPFLSQFAHLTQSPSEIHIYQLSQYSVWYAFDQA
ITSEEIISFLTSFSNPPFPSKVIKQLQDWENYNHKLFIMEIEGHGTCLYSEIRDLLAEVF
PENQMTIFHYKTGEAFPITLNERGIIKQRMLKLGYPVIDCLKVEEGERLGIQLEKDVQLR
PYQIEAVNSYLKPNGYEKGNGFVIMPCGSGKTLVGIGVMTKLDQETLIIAPNDTSLSQWE
NEIMTCTTIDRKKLKTYSSSLKEVGPITLTTYQMLTYKGKEPNLYPHFNLFQERKWGLII
YDEVHLLPAPLFRLTSFMQGKRRLGLTATFIREDGREDDIYSLIGPKRYEVGIKELEHKH
WVAKPVCKEYKIPFREDQWENYLQSSKKEQFKLASENDEKLHVIDMLLKKHSHDQILIIG
QYKKQLKKIADYFSIPIITGETKKSVRENIYDDFRSGQIQALVVSKVANMAVNLPSANVA
IQVSGVYGSRQEEAQRIGRVLRPNTAEKLVYFYSLVTSLTQEEERASNRQLFMKEQGYQY
EEEEWSRCSDIN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagaaaccgctctatatacaagagaatggaatggtttatttcaataccgcacat
cgagaagcaaaaatagttcagccgttcctaagccaatttgctcacttaacacaatcacca
tcagaaatccatatatatcagctgtcacagtattcggtgtggtatgccttcgatcaagct
ataacaagtgaggaaatcatatcttttttaacatcattttcaaaccctccatttccttct
aaagtaatcaaacaactacaagattgggaaaattataatcacaagttatttattatggag
attgaaggacatgggacgtgtttatatagtgagatacgagatttattagctgaggttttt
cctgaaaatcaaatgactatctttcactataagactggtgaagcttttccgattacctta
aatgaaagaggcattataaagcaacgtatgttaaagctaggttatcctgtgatcgattgc
ttaaaagtagaagaaggtgaacgcttaggcatccaactagaaaaagatgttcaactacgc
ccctatcagatagaagctgtgaacagctatctaaaaccaaatggatatgaaaaaggaaat
ggttttgtcattatgccgtgtgggtctggaaaaacgttagtcggtattggtgtaatgaca
aagttagatcaagagacattaatcattgcgccgaatgatacatcactttcacaatgggaa
aacgagatcatgacatgtacaacaattgatagaaaaaagttaaaaacatactctagcagt
ttaaaagaagtaggaccaattacgttaacgacatatcaaatgctaacttataaagggaag
gaacccaatttatatccacactttaacctttttcaagaacggaagtgggggttaattata
tatgacgaagttcatcttttgcctgctccattatttcgtttaacctcgtttatgcaaggt
aaaagaaggttaggattaacagcgacgttcattcgtgaagatggaagagaagatgatatt
tatagtttaattggtccaaaacgttatgaagttggtattaaagagcttgaacataagcat
tgggtagcgaagcctgtatgtaaagaatacaaaataccctttagagaggatcaatgggaa
aattatttacaatcttcaaagaaagagcaatttaaattagccagtgagaatgatgaaaag
ctacatgttatcgacatgttattaaaaaagcactctcatgatcaaatcttaattattggc
cagtataaaaaacaattgaaaaagatagctgattatttttctattccaatcattacaggt
gaaacaaaaaaatcagtacgggaaaacatatacgacgactttcgatcaggacaaatacaa
gctcttgttgttagcaaagttgcgaatatggcagtaaatttaccgtcagcaaatgttgca
attcaagtttcaggggtttatggttctcgtcaagaggaagctcaacgaataggaagagta
ttaagacctaatacagctgaaaagctagtctacttttattcattagtgacatcactgacg
caagaggaagaaagagcttctaatcgtcaattatttatgaaagaacaagggtatcaatac
gaagaggaagagtggtcaagatgttcggacatcaattag
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