Bacillus shivajii: LGQ02_15555
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Entry
LGQ02_15555 CDS
T07881
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bshi
Bacillus shivajii
Pathway
bshi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGQ02_15555 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bshi03400
]
LGQ02_15555 (mutM)
Enzymes [BR:
bshi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LGQ02_15555 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LGQ02_15555 (mutM)
DNA repair and recombination proteins [BR:
bshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LGQ02_15555 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
UCZ52249
LinkDB
All DBs
Position
complement(3199734..3200570)
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AA seq
278 aa
AA seq
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MPELPEVETVRRTLEQLITGEEIKNVVVTWPKMVKQPDDVEHFRVELIGQTFHSIRRRGK
FLVFELDDHALVSHLRMEGRYGLFESSDDIDKHTHVRFLLDNGKELRYSDVRKFGTMHLF
SKGDEENHLPLSQLGVEPFSEEFTKAYLAQFLKRTTRKVKTALLDQTGVVGLGNIYVDEA
LFRANVHPEKISHKLTDEEVERIYPAIKATLKEAIDMGGSSIKTYVNGQGEMGMFQQTLY
VYGRTGEPCKHCGSEISRTVVGGRGTHTCLKCQPLIDN
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaacagtaagacgtacgttagagcaactcattaccggt
gaagaaattaaaaatgtcgttgttacttggccgaaaatggtaaagcagcctgatgatgtg
gaacattttcgggtggagcttattggacaaacgttccattccattagacggagggggaag
ttcctcgtttttgaattggatgatcatgctctcgtttcacatttaagaatggaagggcgc
tacggattatttgaatcatcggatgacattgataaacatactcatgttcgttttttactt
gataacggcaaagaacttcgttacagcgatgttcggaagtttggtacaatgcacttgttt
tcaaaaggggatgaagagaatcaccttcctctctctcaattaggggttgaaccattttcg
gaagagtttactaaagcatatttagcgcaatttttaaagcgaacgactcggaaagtcaag
acagctttgttagatcaaacgggtgtagtaggcttagggaatatttatgtcgatgaagcg
ttatttcgggcaaatgtccaccctgaaaaaataagtcataaactgacagatgaagaagtt
gaaagaatttatcctgctattaaagcgacattaaaagaagcgattgacatgggaggatct
tcaataaaaacgtacgttaatggtcaaggtgaaatggggatgttccaacaaacgctatat
gtttatggacgtaccggagaaccttgcaaacattgtggatcagaaatttctagaaccgtt
gtcggtggaagaggaactcacacttgtcttaaatgtcaaccattaattgataattaa
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