Bacillus shivajii: LGQ02_15560
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Entry
LGQ02_15560 CDS
T07881
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bshi
Bacillus shivajii
Pathway
bshi03030
DNA replication
bshi03410
Base excision repair
bshi03420
Nucleotide excision repair
bshi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGQ02_15560 (polA)
03410 Base excision repair
LGQ02_15560 (polA)
03420 Nucleotide excision repair
LGQ02_15560 (polA)
03440 Homologous recombination
LGQ02_15560 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bshi03032
]
LGQ02_15560 (polA)
03400 DNA repair and recombination proteins [BR:
bshi03400
]
LGQ02_15560 (polA)
Enzymes [BR:
bshi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGQ02_15560 (polA)
DNA replication proteins [BR:
bshi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LGQ02_15560 (polA)
DNA repair and recombination proteins [BR:
bshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LGQ02_15560 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGQ02_15560 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
XPG_I
MIER1_3_C
Motif
Other DBs
NCBI-ProteinID:
UCZ52250
LinkDB
All DBs
Position
complement(3200606..3203230)
Genome browser
AA seq
874 aa
AA seq
DB search
MSKLVLVDGNSVAYRAFFALPLLNNEKGVYTNAVYGFTTMILKILEDEKPSHMLVAFDAG
KTTFRHETFKEYKGKREKTPPELAEQLPLMRDLLKAFNISYYEVENYEADDIIGTLAKNA
SEKDWNVKVYSGDKDLLQLVSNNVHVALTRKGITNVDTYDLDMIDEKYGITPNQIIDMKG
LMGDSSDNIPGVPGVGEKTALKLLKQFETVEGVYESLDDVSGKKLKEKLEANEDQAMMSK
KLATIETSAPVDVSFDDMNVGEPHQEELISLFKELEFSSLLNRFDHGEVEVEEMADLEVT
IANELKGDMFTSTSAMVVEVLDENYHQADIIGISVVNESGRFFIPTEVALQSEMFKTWAA
DDTKKKYIFDAKRAVVALGWQGIILEGVDFDVQIASYLIDPASGSHELSDISQRKNSISV
QHDEAVYGKGKKRQIPAEEELAQHLGRKASAIYELKESLGEELKENEQDALFSELEMPLS
VILGRMEMNGVAIDADELKEMGENLAEKLSKMEKEIHELAGTTFNINSPKQLGEILFDKL
ELPVIKKTKTGYSTSADVLEKLADQHEIIEKILYYRQLGKLNSTYIEGLLKVIHKKTDKI
HTIFNQAITQTGRLSSTEPNLQNIPIRLEEGRKIRHAFVPEEKNAVIFAADYSQIELRVL
AHISQDENLKQAFLENMDVHTKTASDVFNVEADEVTDQMRRTAKAVNFGIVYGISDYGLS
QNLNITRKEAKTFIDRYFDSYPGVKDYMDQVVETAREKGFVTTMLNRRRYLPEITSRNFN
QRSFAERTAMNTPIQGTAADIIKKAMVDMAEEMEKKNMKSRLLLQVHDELIFEVVEEELE
QMKELVPKVMENAIKIDVPLTVDYSYGETWYDAK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaactcgtcttagtagatggaaatagtgttgcctaccgtgctttttttgcgtta
cctctcttaaataacgaaaaaggggtttacacaaacgcagtgtacggttttacgacgatg
attttaaaaatattagaagatgaaaagccatcacatatgctagtagcatttgatgcagga
aaaacgacgtttcgtcatgaaactttcaaagaatataaaggaaaacgagaaaagacaccg
ccagaactcgctgaacaacttccgcttatgcgcgacttgttaaaagccttcaatatttcc
tactacgaagtagaaaattatgaagcagatgatattatcgggacgctagcgaaaaatgcg
tcagaaaaagattggaatgtgaaagtatacagtggagataaagaccttcttcagctcgtt
tcaaataacgtgcatgttgcgttaacgagaaaaggaattacgaatgtagatacatatgat
ctggatatgattgatgaaaaatatggaatcaccccaaatcaaatcattgatatgaaagga
ctcatgggcgatagctcggataatatcccaggtgttccaggtgttggtgagaaaactgca
cttaagctacttaaacagtttgaaacggtcgaaggtgtatatgaatccttagatgatgtt
tcagggaaaaagttaaaagaaaagcttgaagcaaatgaagatcaagctatgatgagtaag
aaactcgctacaattgaaacaagtgctcctgtcgatgtatcttttgacgatatgaatgtt
ggtgaacctcatcaagaagaactgatctcgctttttaaagagctagagttttcttcttta
ttaaaccgatttgatcatggtgaagttgaagtagaagaaatggctgatttagaagtaact
atcgctaatgaattgaaaggcgacatgtttacaagcacatcagcgatggtcgttgaagtt
ttggatgaaaactatcatcaagctgatattatcggaatttctgtggttaatgaatctgga
cgtttctttatcccaacggaagtagcacttcaaagtgagatgttcaaaacatgggctgca
gatgatacgaaaaagaaatatatttttgatgcgaaaagagccgttgttgcactaggttgg
caagggatcatacttgaaggtgtcgattttgatgttcaaatagcatcttatttaattgac
ccagcttcaggttcacatgagctctcagacatttctcaacgcaaaaacagcatctctgtt
caacatgatgaagcagtttatggaaaagggaaaaagcgccaaatcccagcagaagaagag
ctagcacaacatttaggtagaaaagcttctgcaatatatgagttgaaagaatctttagga
gaagagttaaaagaaaatgaacaagatgctctttttagtgaactggagatgccactctct
gtcattctcggtcgcatggaaatgaacggggtagcaattgatgctgatgaattaaaagaa
atgggtgagaacttagcggagaagctcagtaaaatggaaaaagagattcatgaattggct
ggcacaacgtttaacattaactcgcctaagcaacttggtgaaattttatttgacaagctt
gagctcccagtcatcaagaaaacgaaaacaggttattcgacatccgctgatgtgttagaa
aagcttgccgaccagcatgaaattatcgagaagatcttatattaccgacaattagggaaa
ctaaactcaacttatattgaaggtttactgaaagtcattcacaaaaagacagataaaatt
catacgatctttaaccaagcaattacacaaaccggtcgattaagttcaactgaaccgaac
ttacaaaacattccgatccgtttagaggaagggcgaaagattcgacatgcgtttgtccct
gaagaaaaaaatgctgtcatttttgcagccgattattcgcaaatcgagttacgcgtacta
gctcatatttcacaagatgaaaatttaaaacaagcttttcttgaaaatatggacgtccat
acgaaaacagcatctgatgttttcaatgtcgaagcagatgaagtaaccgatcaaatgaga
agaactgcaaaagctgttaactttgggattgtatatgggattagtgactatggactatca
caaaacttaaatattacaagaaaagaagcaaagacgtttattgaccgttattttgatagt
tacccgggtgttaaagactatatggatcaagttgtggaaacggcaagggaaaaaggattt
gttacgacaatgctaaaccgtcgtcgttacttacctgaaattacaagccgtaactttaat
caacgtagttttgcagagagaacagcaatgaatactccgatccaaggtacagctgcagat
attataaaaaaagccatggtcgacatggcagaagaaatggaaaagaaaaatatgaaatcc
cgcttactacttcaagtacatgacgaattaatttttgaagtggttgaagaagaattagaa
cagatgaaagagctcgtgccaaaagtgatggaaaatgcaattaaaatagatgtcccgtta
accgtagactattcctatggtgagacttggtacgacgcgaaataa
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