Bacillus shivajii: LGQ02_16010
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Entry
LGQ02_16010 CDS
T07881
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bshi
Bacillus shivajii
Brite
KEGG Orthology (KO) [BR:
bshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bshi03016
]
LGQ02_16010 (thpR)
Enzymes [BR:
bshi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LGQ02_16010 (thpR)
Transfer RNA biogenesis [BR:
bshi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LGQ02_16010 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Retrotrans_gag
Motif
Other DBs
NCBI-ProteinID:
UCZ52334
LinkDB
All DBs
Position
complement(3299122..3299700)
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AA seq
192 aa
AA seq
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MSQAHYFIGVHTSNEVQNHLQTLQQEASLTQYYRKLTYVNDFHLTLLFLGGWESEKRRNL
WSALQEQGPHLQPFQLTLSEVGMFGNKTLPRVYWVGVEKNDALFKFQSLVEQQAKSSDFP
VQDRPFRPHITLGKGLKDSKVKEVPQKVNVKPLSWDIRQLNLYKVKPGEKPMYEIESSIY
FSHPRKKMIKYE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagcccattattttattggagttcatacatcaaatgaagtacaaaatcattta
caaacacttcaacaagaggcaagtttaactcaatattatcgaaagttaacctatgttaac
gactttcacttaacgttgctttttttaggaggttgggagagcgaaaaacgaagaaattta
tggagtgcccttcaagaacaaggaccacatttacaaccttttcaactaacattaagtgaa
gtaggaatgttcggaaataaaacgttacccagggtatattgggtaggtgttgaaaaaaat
gatgcattatttaagttccaatcccttgttgaacagcaggcaaaatcctctgactttcca
gttcaagaccgtcctttcagaccgcatataacgttaggaaagggattaaaagatagtaag
gtcaaagaagtacctcaaaaggtaaatgtcaagcctttgtcttgggatatacgacaatta
aacctttataaagtaaagccgggggagaaaccgatgtatgaaattgaatcatcaatctat
ttctctcaccctcgaaaaaaaatgataaaatatgaatga
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