Bacillus siamensis: CWD84_01055
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Entry
CWD84_01055 CDS
T06647
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsia
Bacillus siamensis
Pathway
bsia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWD84_01055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsia03019
]
CWD84_01055
03009 Ribosome biogenesis [BR:
bsia03009
]
CWD84_01055
Enzymes [BR:
bsia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWD84_01055
Messenger RNA biogenesis [BR:
bsia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWD84_01055
Ribosome biogenesis [BR:
bsia03009
]
Prokaryotic type
rRNA helicases
CWD84_01055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
NAT10_TcmA_helicase
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AUJ75507
UniProt:
A0AAI8MYK0
LinkDB
All DBs
Position
195360..196799
Genome browser
AA seq
479 aa
AA seq
DB search
MNEFNEYAISPDIQRALKGLQYTEPTEVQRRVIPAALQKKDLVVKSQTGSGKTAAFGIPI
CELAEWEENKPQALILTPTRELAAQIKEDITNIGRFKRIKATAVFGKASFDKQKTELKQK
SHVVAGTPGRVLDHIEKGTLPLERLAYVVIDEADEMLNMGFIEQVEAIIQHLPKNRVTML
FSATLPDDVEKLSRTYMKDPELIEVKAEGLTTKDIEHFVTGTAEEDKSSLLCDVLITENP
DSCIIFCRTKERVIQLTDELDRLGYPCDKIHGGMVQEDRFDVMNEFKRGEFRYLVATDVA
ARGIDIENISLVINYDIPLEKESYVHRTGRTGRAGHRGRAITFVTPFESRFLNDIETYIG
FRIQKREAPSEKETAERKAAFAEKLNARPDVKTDRSEQLNKDIMKLYFNGGKKKKIRAVD
FVGTIAKIDGVTADDIGIITIMDNASFVEILNGKGPQVLKVMKNTTVKGKKLKVNKANK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtttaatgaatacgcgatcagccctgatatccaacgggcgctgaaaggattg
caatacaccgagccgactgaagtgcagcggcgcgtcatccccgccgcgctgcaaaaaaaa
gatctcgtcgtcaaatcgcagacgggcagcggcaaaaccgcggccttcggcattccgatc
tgcgagcttgcggagtgggaggaaaacaaaccgcaggccctgattttaacgccgacccgc
gagcttgcggcgcagattaaagaagatattacgaatatcggccgttttaaacggataaaa
gccacggcggttttcggaaaagcttcttttgataaacagaaaaccgaactgaagcaaaaa
agccacgttgttgccggaacgccggggcgagtgcttgatcatatagaaaaagggacgctg
ccgcttgaacggctggcgtatgtggtgattgacgaagcggacgaaatgctgaatatggga
tttattgaacaggtggaagccatcattcagcatctgccgaaaaacagagtcaccatgctg
ttttcagcgacgctgcctgacgacgtcgagaagctgagccgcacatatatgaaagaccct
gaattgattgaagtaaaagcggaaggcctgacgacaaaagatattgagcattttgtcacc
ggaacagcagaagaggataaatcatcattgctgtgtgatgtcctgatcaccgaaaacccg
gacagctgcatcatattctgccggacaaaagaaagagtcatccagttaaccgatgagctg
gacaggctgggctatccttgcgataaaattcacggcggcatggtgcaggaagaccgcttt
gacgtcatgaatgagttcaagcgcggcgagttccgctatctcgttgcgaccgatgttgcc
gccagaggaattgatatcgaaaacatcagcctcgtcatcaattatgatattccgcttgaa
aaagaaagctatgtgcaccgcactggccgaacggggcgcgccggacaccgcggccgggcc
attacgtttgtgacgccgtttgaatcgcggtttctgaatgacattgagacatatatcggt
ttccgcatccaaaagcgtgaagcaccgtcagaaaaagaaacagcggaacggaaagcggct
tttgcggaaaaattgaacgcccgcccagacgtcaaaacagacagaagcgaacagttaaac
aaagacatcatgaagctgtactttaacggcgggaagaaaaagaaaatcagagccgttgat
tttgtaggaacgatcgccaaaattgacggtgtgacagctgatgacatcggcattatcaca
atcatggacaacgcctctttcgtggagattttaaacggaaaaggccctcaagttcttaaa
gtgatgaagaacacaaccgtcaaagggaaaaagctgaaggtgaataaagcgaataaatga
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