Bacillus siamensis: CWD84_07110
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Entry
CWD84_07110 CDS
T06647
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bsia
Bacillus siamensis
Pathway
bsia03410
Base excision repair
bsia03430
Mismatch repair
bsia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CWD84_07110 (recJ)
03430 Mismatch repair
CWD84_07110 (recJ)
03440 Homologous recombination
CWD84_07110 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsia03400
]
CWD84_07110 (recJ)
DNA repair and recombination proteins [BR:
bsia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CWD84_07110 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CWD84_07110 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CWD84_07110 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PGM_PMM_II
Motif
Other DBs
NCBI-ProteinID:
AUJ76588
UniProt:
A0AAI8MZM9
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All DBs
Position
1355146..1357506
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AA seq
786 aa
AA seq
DB search
MLASKMRWEIQQPDQEKVKSLTEQLDITPLVASLLVKRGFDTAESARHFLHTKDADFYDP
YELKGMREAVDRIKLAVSQGEPIMIYGDYDADGVTSTSVMLTALRQLSADVDFYIPDRFT
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAEVAKELGLDVIITDHHEPGPELPDVF
AIIHPKQPGCSYPFKELAGVGVAFKLAHALTGSLPEAMLDLAAIGTVADLVPLHDENRLI
ASLGIEKLRTTNRPGLKALIKLSGGDIGQADEETVGFQVAPRLNAVGRIEQADPAVHLLM
TEDQFEAEELASDIDRLNKERQKMVKTMTEEAVEMVQQQGGNPSAIVVAKAGWNPGVVGI
VASKLAERFYRPAVVLGIDEEQGIAKGSARSIRGFNLFTSLSQCRDILPHFGGHPMAAGM
TLKAEDVPDLRDRLNQLAEETLTEEDFIPIQEIDLVCGVEDITVESITELNMLSPFGMLN
PKPHVMVENAVLDEVRLIGANKNHVKMTVKNDAAVLDCVGFNQGELEAGIVPGSAISIVG
EMSINEWNNRKKPQLMIKDAAVLEWQLFDIRGKRTWEDTVAALPKEKRVLISFNEKTVRK
LRGEELPDELAQITSESEAEALPLDGKYAVFLDVPPSEERLKRLLDGKKPERIYFVFINH
EEHFLSSFPSRSDFKWFYAFLLKRGNFDLSKHGSELARHKGWSIDTINFMTKVFFDLGFV
KIEDGVLSVVSGAKKRDLADSQTYQVKQQLMELDQKLNYSAAHELKEWLNKLMNQGSEAY
ESTRRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgctgggaaatccagcagccggatcaggaaaaggtcaaatca
ctcacagaacaattggacataacacctcttgtggcatcgctgcttgtaaaaagaggtttt
gatactgccgaaagcgcaaggcattttttacatacaaaggatgcagacttttatgacccg
tatgaattaaaaggaatgcgggaagcagttgatcggataaagctggcggtttctcaaggg
gaaccgattatgatttacggagattacgatgcagacggtgttacaagcacgtcggtgatg
ctgacggcactcagacagctgtcggcggacgttgacttttatattcccgaccgtttcaca
gaaggctacggcccgaatgaacaagctttccgctccataaaagagcggggattttcgctg
atcattacagtggatacgggaatcgccgccgtccatgaagctgaagtcgcaaaagagctg
ggcttagacgtcattattaccgaccaccatgagccgggacccgagcttcccgacgtattc
gcgatcatccacccgaagcagccgggctgcagctacccgtttaaagaattggccggcgtc
ggtgtggcgtttaagcttgcccacgcgcttacgggttctttgccggaagctatgctggac
ttagcggccatcggtacggttgcggatctggtgccgctgcatgatgaaaacagattaatt
gcgtcacttgggatcgaaaagcttcggacgacaaatcggccgggtctcaaagctctgatt
aagctttccggcggggatatcggacaagctgatgaggaaacggtcgggtttcaggttgca
ccgaggctgaatgccgtcggaagaatagaacaggctgatcccgccgtgcatctgctgatg
accgaagaccagtttgaagcggaggaattggcttcggatattgaccggctgaataaggaa
cgccagaaaatggtgaaaaccatgaccgaagaggctgttgaaatggttcagcagcaaggc
ggaaacccgtctgccattgtagtggcaaaagccggctggaacccgggggttgtcggtatt
gtcgcatcgaagctcgctgaacgtttttatcgccccgctgtcgtgctggggatagatgag
gagcagggaatcgctaaaggatcggcgcgaagcatcaggggtttcaacctttttacgagc
ctttcacagtgcagagacattctccctcatttcggcgggcatccgatggccgcaggaatg
actttaaaggctgaagatgtgccggatttaagagacaggctgaatcaattggctgaagaa
acccttacggaagaggattttatcccgattcaggagattgatcttgtctgcggcgtcgaa
gacataaccgttgaaagcattacagaattgaatatgctctcgccgttcggcatgcttaac
cctaaaccgcatgtcatggtggaaaacgccgtgcttgatgaagtgcgcctgatcggagcg
aataaaaatcacgtgaaaatgacggtgaaaaatgatgccgccgttctcgattgcgtcggc
tttaaccaaggagagctggaagccggaattgttcccggatcagcgatttccattgtcggc
gaaatgtctattaatgaatggaacaacagaaagaaaccccagctgatgattaaagacgct
gcggtgctggaatggcagctttttgatatcagaggcaagcggacgtgggaagatacggtt
gctgcgctgccgaaggaaaaacgggtgctcatcagttttaacgaaaaaactgtccgaaaa
ctccgtggcgaagagctgccggacgagctggctcagatcacgtcggaatccgaggcggag
gctcttccgcttgacggaaagtatgccgtctttctggatgtgccgccgtcagaggagcgg
ctcaagcgtttgcttgacgggaagaagccggaacggatttattttgtttttatcaatcat
gaagaacattttctgtcctcatttccatcgcggagtgatttcaagtggttttacgcattt
ctcttgaaaaggggcaattttgacttaagtaagcatggttcggagcttgcgagacacaaa
ggatggtcaattgacacaatcaatttcatgacaaaggtgttttttgatctcggttttgtt
aaaatagaagatggtgtgctgtctgtcgtgagcggcgcgaaaaaacgcgacctcgcagat
tcgcaaacctaccaggtaaaacagcagctgatggaattagaccagaagctcaattattcc
gcggcccatgagctgaaggaatggctgaataagctgatgaaccaaggttcagaggcttat
gaaagtacgaggaggacatag
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integrated database retrieval system
