Bacillus siamensis: CWD84_09200
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Entry
CWD84_09200 CDS
T06647
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bsia
Bacillus siamensis
Pathway
bsia02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsia00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CWD84_09200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsia03021
]
CWD84_09200
Transcription machinery [BR:
bsia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CWD84_09200
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AUJ76960
UniProt:
A0AAI8MY43
LinkDB
All DBs
Position
1695830..1696951
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AA seq
373 aa
AA seq
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MADKQTHETETELTLDQVKDQLTETGKKRGVLTYEEIAERMSSFEIESDQMDEYYEFLGE
QGVELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVNLLSAK
EEITYAQKIEEGDEESKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPS
PEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaaacccacgagacagaaacagaacttacactggatcaggtaaaagac
cagcttactgaaaccggaaaaaaacgtggcgttttaacatatgaagaaattgctgaacgc
atgtccagctttgaaattgaatcagaccaaatggatgagtattatgaatttttaggagaa
caaggtgttgaattaattagtgaaaatgaagaaacggaagatcctaatattcaacagctt
gccaaagccgaagaagaatttgaccttaatgacctcagcgtaccgcctggcgtaaagatc
aatgatccagtccgcatgtaccttaaggaaatcggacgggtaaatcttctttctgctaaa
gaagaaatcacctatgctcaaaaaattgaagaaggtgacgaagaatctaaacgcagattg
gctgaagcaaaccttcgtttagttgtcagcattgctaaacggtatgtcggccgcggcatg
cttttcttagacttgattcaagaaggaaacatgggtctcatgaaagccgtcgaaaagttt
gactaccgtaaaggatataaattcagtacgtatgcgacttggtggatcagacaggcgatt
acacgcgccatcgctgaccaggcgagaacgatccgtatcccggttcacatggtggaaacg
atcaacaaattaatccgtgtgcagcgtcagcttcttcaggatctgggcagagagccgtca
ccggaagagattgctgaagacatggatcttacgcctgaaaaagttcgtgaaatattaaaa
attgcccaagagcctgtttctttagaaacgccgatcggtgaagaagacgattcacatctc
ggtgatttcattgaagaccaggaagcgacgtctccgtcggatcatgcggcatatgagctt
ttgaaagaacagctggaagatgtgctggatacgttgacggatcgtgaagaaaatgtgctg
cgtctccgtttcggtctggatgacggacgcacaagaacgcttgaagaagtcggcaaagtg
tttggagtaacgagagagcgtattcgccaaattgaagcaaaagcgcttcgtaaattgaga
catccaagcagaagcaaacgtctgaaggattttctcgaatag
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