Bacillus siamensis: CWD84_13015
Help
Entry
CWD84_13015 CDS
T06647
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bsia
Bacillus siamensis
Pathway
bsia03030
DNA replication
bsia03430
Mismatch repair
bsia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWD84_13015 (polC)
03430 Mismatch repair
CWD84_13015 (polC)
03440 Homologous recombination
CWD84_13015 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsia03032
]
CWD84_13015 (polC)
03400 DNA repair and recombination proteins [BR:
bsia03400
]
CWD84_13015 (polC)
Enzymes [BR:
bsia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWD84_13015 (polC)
DNA replication proteins [BR:
bsia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWD84_13015 (polC)
DNA repair and recombination proteins [BR:
bsia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWD84_13015 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AUJ77671
UniProt:
A0A2K9KBX6
LinkDB
All DBs
Position
complement(2551719..2556032)
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQLNMTDDTFMTYFEDGEIDKLTIHKAEKAWHFQFRFKALLPYQI
YDSFMMRLTQSFAHIARVTSSIQVIDPRVSEELVQDYWTRCIEELEGTSPPMVALLNQQK
PKLKGNKLIVKTKTDTEASALKNKYSALIQHSYRQFGFPELQLDTETFVSDQEVQKFREQ
KLAEDQERAMQALIEMEKKEKEGDEDQAPSGPLVIGYQIKENEEIRTLDSIMDEERRITV
QGYVFDAETRELKSGRTLCIFKITDYTNSILVKMFAREKEDAALMKTLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAETREDTAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANIVDDGVPIAYNPAHRLLEEDT
YVVFDVETTGLSAVYDTIIELAAVKIRGGEIIDKFEAFANPHHPLSATTIELTGITDDMV
RDAPDVVDVVRDFKEWIGDDVLVAHNASFDMGFLNVAYKRLLKTEKAKNPVIDTLELARF
LYPEFKNHRLNTLCKKFDIELTQHHRAVFDAEATGYLLLKMLKDAAEKDIFYHDQLNENM
GQSNAYQRSRPYHATLLAVNETGLKNLFKLVSISHIQYFYRVPRIPRSQLNKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLQLELVRDEKALKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGAEKAKEIVVHNTQKVASMIEEIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGE
ELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLAPHYVCPSCRYSEFFNDGSVGSGFDLPDKSCPSCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPHAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDHNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNTCELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKKNNVPNWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIRAVMDD
ISSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSASEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaagacagtttcagattcttcttcagcagcttaatatg
acagatgataccttcatgacatactttgaagacggagagattgataaactgacaatccat
aaagcagaaaaggcctggcactttcaatttcgctttaaggctcttttgccgtatcaaata
tatgactcattcatgatgagattaacacaatcgtttgctcacatcgcccgggtcacgtcg
tccattcaagtcattgatcctagagtgtcagaggagcttgtacaggattattggacacgc
tgtatcgaagagcttgaaggaacctcgccgccgatggtggcacttttgaatcagcagaaa
ccgaagctcaagggaaacaagctgatcgtgaaaacaaaaacagatacagaagcatcggcg
ctcaaaaataaatacagcgctctgattcagcacagctatcgtcaattcggttttccggaa
ctgcagctggataccgaaactttcgtgtctgaccaagaagtccagaaattccgcgagcaa
aagcttgctgaagatcaggaacgggcgatgcaggcgcttatcgaaatggagaagaaggaa
aaagagggcgatgaggatcaagcgccgtccggaccgcttgtcatcggctatcaaattaaa
gagaacgaagaaatccggacgcttgacagcatcatggatgaagaaagaagaattacggtg
cagggatatgtgtttgatgctgaaacacgcgagctgaaaagcggacgcacgctctgcatt
ttcaaaatcaccgactatacaaacagtattttagtaaaaatgtttgcaagagaaaaagaa
gacgccgccctgatgaaaacactgaaaaagggcatgtgggtgaaagcgcggggaagcatc
caaaacgatacattcgtcagagacctcgtcatgattgcaaatgacgtaaatgaaataaaa
gccgaaacccgtgaagacaccgctcctgaaggcgaaaagcgggtagagcttcatctgcat
tccccgatgagtcaaatggacgctgtaacgggaatcggaaagcttgtcgaacaggcgaaa
aaatgggggcatgaagcgattgccttaactgatcatgccgttgtgcagtccttcccggat
gcctattccgccgcgaaaaaacacggtattaaaatgatttacggaatggaagccaatatc
gtagatgacggcgttccgatcgcatacaatcccgctcaccgtctcctggaagaggacaca
tatgtcgtctttgacgttgaaacgacaggtctgtccgcggtgtatgacacgatcattgag
cttgccgcagtcaaaataagaggcggagaaatcattgataaatttgaagcgttcgccaat
ccgcatcatccgctgtcagcaacgacgatagagcttaccgggattacggatgatatggtc
cgcgacgctcccgatgtcgttgacgtcgtccgggattttaaagaatggatcggcgatgat
gtgcttgtggctcataacgccagctttgatatgggatttttaaatgtagcgtacaagcgc
cttctgaaaacggaaaaagcgaaaaatccggttattgatacgctggaacttgcgcgtttc
ctgtatcctgaatttaaaaatcaccgcttaaatacgttatgtaaaaagtttgatattgaa
ttaacccagcatcaccgtgcggtctttgacgctgaagcaacgggatacctgctgttgaaa
atgctcaaagacgcggctgaaaaagatattttttatcatgatcagctgaatgagaatatg
ggacaatccaatgcttaccaaagatcgagaccttatcacgcaacattgcttgccgtaaat
gagaccggcctgaaaaatctgtttaagctcgtgtcgatttctcatattcaatatttctac
agagtgccgcgcattccgaggtcacagcttaataaatacagagaaggcctgttaatcggc
tctgcctgtgacaggggagaggtttttgaaggcatgatgcaaaaatcacctgaagaggtt
gaagatatcgcatcattctatgactatcttgaagtgcagccgccggaagtatacagacac
ctgctgcagcttgagctcgtccgggatgaaaaagcgctgaaagaaatcatcgccaacatt
acgaagctcggggaaaaattgaataagccggtcgttgccacggggaatgtccactattta
aacgatgaggataaaatttaccggaagatcttaatttcttcccaaggcggcgccaacccg
ttaaacaggcacgaactgccaaaagtgcacttcagaacgacagatgaaatgctggaggct
ttctcttttctgggtgcggaaaaagcgaaagaaatcgtagttcataatacgcagaaagtc
gcttcgatgatcgaagagatcaagccgattaaagacgatctgtacacgccgaaaattgag
ggtgctgatgaagaaatccgtgaaatgagctatcagcgcgcgagaagcatttacggtgag
gagcttcctgaaattgttgaagcgagaatagaaaaagaattaaaaagcatcatcggccac
ggattcgccgttatttatctcatttcacataagcttgtcaaacggtctttggatgacggc
tatctcgtcggctcccgtgggtccgtcggttcatcacttgtggcgaccttaacggaaatt
actgaagtgaacccgctcgctccgcattatgtatgcccgagctgccggtattccgaattc
tttaatgacggatcagtcggttccggttttgaccttccggataaaagctgcccgtcttgc
ggcactcctttgaaaaaggacggacatgatattccgtttgaaacgttcttaggctttaaa
ggtgacaaagtacccgatatcgatttgaacttctcaggtgaatatcagccgcatgcccat
aactacacgaaagtgctgttcggggaagataatgtttatcgcgcgggaacaatcggcacc
gttgcggaaaagacggcttacggatatgtgaaaggctatgcgggtgaccacaaccttcat
atgcgcggcgcggaaatcgaccgccttgtacagggatgcaccggcgttaagagaacgacc
ggtcagcaccctgggggcattatcgttgtgccggattacatggatatttacgatttttca
ccgattcaattccctgctgatgcgacggggtctgaatggaaaacgactcactttgacttc
cactccattcatgacaacctgctgaagcttgatatattggggcacgatgatccgacagtc
atccggatgcttcaggatttaagcggaattgatccgaagacgattccgacagatgatccg
gaagtcatgaagattttccaaggcacagaatcgctcggcgtcactgaagaacagatcggc
tgtaaaacggggacgctcggcattcctgaattcgggacgcgatttgtgcggcagatgctt
gaggatacaaagccgacgacgttctctgagcttgtccagatttccgggctttcccacgga
acggacgtatggctcggcaatgcacaggaactgatacacaacaatacgtgtgaactgagc
gaagtgatcggctgccgcgatgacattatggtttacttgatttatcagggccttgagcct
tcactggcctttaagatcatggaatttgtccgtaaaggcaaaggcctgacgccggaatgg
gaagaagaaatgaaaaagaacaatgtgccgaactggtatattgattcatgcaaaaaaatc
aaatacatgttcccgaaagcccacgccgctgcatacgtgctgatggcggtgcggattgca
tactttaaagtacatcacgcgcttttatattatgctgcgtattttactgtgcgcgcagat
gactttgacattgatacgatgattaaaggctcgactgccatcagagcggtgatggatgat
atcagctctaaagggcttgatgcttcgccgaaggaaaaaaacctcctgaccgtgttagag
cttgcgcttgaaatgtgtgaacgcggctattctttccagaaggtcgatctataccgttca
agcgcttcggaatttatcattgacggcaacagtctgattccgccgttcaactcgattccg
gggcttggaaccaatgccgctctcaatattgtaaaagcgcgggaagaaggagagttcctt
tcaaaagaggaccttcaaaaacgcggaaaagtgtcaaaaaccattttagagtatttagac
cgccacggctgtctggagtcgctcccggatcaaaatcagctgtctctgttttaa
DBGET
integrated database retrieval system
