Bacillus siamensis: CWD84_16340
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Entry
CWD84_16340 CDS
T06647
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bsia
Bacillus siamensis
Brite
KEGG Orthology (KO) [BR:
bsia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsia03400
]
CWD84_16340 (addA)
Enzymes [BR:
bsia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWD84_16340 (addA)
DNA repair and recombination proteins [BR:
bsia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CWD84_16340 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUJ79398
UniProt:
A0AAI8HSI3
LinkDB
All DBs
Position
complement(3196879..3200583)
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AA seq
1234 aa
AA seq
DB search
MQIPKPKDSIWTDDQWSAIVSSGRDILVAAAAGSGKTAVLVERMIRKITADEDPVDVDRL
LVVTFTNASAAEMKHRIAEALEKELAKNPGSLHIRRQLSLLNRASISTLHSFCLQVLKKY
YYMIDLDPGFRMADQTEGELLGDEVLDELFEDEYAKGNQAFFELVDRYTTDRHDLDLQDL
VKRVYEYSRSHPDPEAWLKSFVRLYDVTEESKMEELPFYEYVREDAEMALFGAKQKLEKA
LELTKAPGGPAPRADHFLDDLQQIEELISCRHDFEALYERVPAVTFKRAKAVKGDEFDKA
LLDEATDLRNGAKKLIEKLKTDYFTRSPQDHVKSLTDMKPVIETLVQLVISYGKRFEAAK
QEKSIIDFSDLEHYCLAILTAADEDGRRVPSEAAVYYQEQFHEVLVDEYQDTNLVQESIL
QLVKSGNEEAGNLFMVGDVKQSIYRFRLAEPLLFLGKYKRFTESGEGAGQKVDLNQNFRS
RSDILDSTNFLFKQLMGGKIGEVDYDEQAALKLGASYPPNDAAKTELLLIDSADGADSSE
DAEDFETVHWEAKAIAGEIRKLVSSPFKVYDGKTKTHRNIQYRDIVILLRSMPWAPQLME
ELKNQGIPVYANLTSGYFEAVEVAAALSVLKVIDNPYQDIPLASVLRSPIVGCDENELAL
IRLEKKKAPFYEALKAYIANGDRHDELYQKLRTFYDHLQKWRSFSTNHSVAELIWEVYRD
TGYFDYAGGMPGGKQRQANLRVLYDRARSYEATAFRGLFRFLRFIERMQERGDDLGTARA
LSEQEDVVRLMTIHSSKGLEFPVVFTAGLGRSFNMMDLNKSYLLDKELGFGTKYIHPELR
ISYPTLPLVAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKNREKQLAKWQAQADR
ADWLLSEFDRYQAASYLDFIGPALIRHRDMEAHRPPGLSAPEDIAHDPSRFHIRMLQQSE
LLEDNPKERAEEKSKRLKAIQQGEPIPDSFSFDDQARRLLEWEYPYRELTAIRTKQSVSE
LKRKQEYEDEYSGRSLIKPSGDTLLYRRPGFMMKKGLTAAEKGTAMHTVMQHIPLTHVPT
AEEAERTVQTLHEKELLTEEQRDAIDIEDIIQFFETEIGKDLLGARRIDREVPFSMALPA
GEVYKDAETAGEPLLVQGIIDCLYETADGLYLLDYKTDRIEGKFRNGFEGAAPILQKRYE
TQIELYTKAIEQITKTKVKGRALYFFDGGHVLTL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcctaaaccgaaagacagcatatggacggatgaccaatggagcgccatcgtt
tcttccggccgcgatattctggtcgctgccgcagccggatcaggtaaaacggccgtgctc
gtggaacggatgatcagaaagataaccgcggatgaagatccggttgatgttgacaggctc
cttgtggtgacctttacaaacgcctcagcagcggaaatgaagcatcggatcgctgaagca
ttagaaaaagagctcgccaaaaatccgggatctctccatatcagacggcagctctctcta
ttaaatcgggcgagcatttcgacgctgcactctttctgtctgcaggtgcttaaaaaatat
tattatatgattgatcttgacccgggctttcggatggctgaccagacggaaggcgaattg
ctcggagacgaagtccttgatgagctgtttgaggatgaatacgcaaaagggaatcaagcg
ttttttgagcttgtggacagatatacgacggacaggcatgatttggatcttcaagatctc
gtcaagcgggtgtacgagtattcacggtctcatcctgatccggaagcgtggctgaaaagc
tttgtccgcctatatgatgtgacggaagaaagcaaaatggaagagctgccgttttacgag
tatgtgagagaagatgctgaaatggcgctcttcggggcaaagcaaaagcttgaaaaggcg
cttgaactgacaaaagcgcccggcgggccggcgccgcgcgctgatcattttttggatgat
cttcagcagatagaagagctgatcagctgccggcatgactttgaggcgctgtatgaacgg
gttcccgcggtcacatttaagcgggctaaggcggtaaaaggtgatgaatttgacaaggcg
cttttggatgaagcgaccgatttgcgaaacggcgcgaaaaaactgatcgaaaagttaaag
accgattactttacaagaagcccgcaagatcatgtaaagagtttaacagacatgaagcct
gtcattgaaacgctcgttcagctcgtgatatcgtacggaaaacgatttgaagcggcgaaa
caagaaaaatcaatcattgatttctcagatttggaacattactgtctggcgattttaact
gcggctgatgaagacggccggcgggtgccgagtgaagcggccgtttattatcaagagcag
ttccatgaggttctggttgatgaatatcaagataccaatcttgtacaggaatctattctg
cagcttgtgaaaagcgggaatgaagaggcgggaaatctgtttatggtaggcgatgtcaaa
caatcgatctaccgattcagacttgccgagccgctgctgtttctcgggaaatataaaagg
tttacagaaagcggggaaggcgcgggacagaaagttgacctgaaccaaaacttccgcagc
cgctccgatattttggacagtacgaatttcttgtttaagcagctgatgggcggcaaaatc
ggcgaagtggactacgatgaacaggcggcattgaaactcggtgcgtcgtatccgccgaat
gacgcggcaaaaacggaactgctgctcattgacagcgctgatggcgcagacagctccgag
gatgccgaagactttgaaactgtgcactgggaagcgaaagcgatagccggggagatccga
aagcttgtctcatctccgtttaaggtatatgacggcaaaacaaaaacacaccggaatatc
cagtaccgggatatcgtaattttgctgcgttccatgccttgggcgccgcaattgatggaa
gaactgaaaaaccagggcattccggtttacgccaatttgacgtcgggttattttgaagcc
gtggaggtggctgcggcgctttcggtcttaaaggtgattgacaacccgtatcaggatatt
ccgcttgcttccgtattgcgctcgcccattgtcggctgtgacgaaaatgaacttgcgctg
atacgactggaaaagaaaaaagcgccgttttatgaagcgctgaaagcatatatagcgaac
ggtgacagacatgatgagctgtatcaaaagctgagaacattttatgaccatctgcaaaag
tggcggtcattctcgacgaatcattcggtagctgagctgatttgggaagtataccgcgat
accgggtattttgattatgcaggcggcatgcctggcggaaagcagcgccaggccaatctg
cgcgtcttgtatgaccgggcgcgctcgtacgaagcgacggcgttccgcgggttattccgc
tttttgcggttcattgaacggatgcaggagcgcggcgatgatctggggacggcgcgggcg
ctcagcgagcaggaggatgtcgtgcggctgatgacgatccacagcagcaaaggacttgaa
ttccccgtcgttttcactgccggactcggcagaagttttaatatgatggatctcaacaaa
tcatatctgcttgataaagagctcggtttcggaacgaagtatattcatccggaactcaga
atcagctatccgactctgccgcttgtggcgatgaagaaaaaaatgcgcagagagctttta
tcagaagaattgcgcgtgttatatgtggcgctgacaagagcgaaggaaaagctgtttctc
atcggttcctgcaaaaaccgggaaaaacagctggctaaatggcaggcgcaagcggacagg
gccgactggcttctctctgaattcgaccgctatcaggcggcatcttatttggactttatc
gggccggcgcttatccgccaccgtgacatggaggcgcacaggccgccgggtctttcggct
ccggaggatatcgcgcacgacccgtcccgttttcatatccggatgctgcagcaaagtgaa
ctgctggaagataacccaaaagaacgtgctgaagaaaagagcaaacgtctcaaggcgatt
cagcagggcgagccgattcctgattcgttttcatttgatgatcaggcgcgccgtctcctt
gaatgggaatacccgtaccgagagctgacggctatcagaacgaagcagtcagtttctgag
ctgaagagaaagcaagaatacgaggatgaatacagcggccgctctctcatcaaaccgtca
ggggacacgcttttatacaggcgtcccggttttatgatgaaaaaagggctgacagccgcc
gaaaaagggacggcgatgcatacggtgatgcagcatataccgctgacgcacgttccgact
gccgaagaagcggagcggacggttcagacgcttcacgaaaaagagctgctgacagaagaa
cagcgggacgctattgatatcgaagacattatacagtttttcgaaactgaaatcgggaaa
gatcttctcggggcgcggcggattgatcgggaggtgccgttcagtatggcgcttccggcc
ggcgaggtgtacaaggatgccgaaacggccggtgaaccgctgctcgtgcaggggattatt
gactgcctctacgaaacggcggacggactctatttgctggactataaaacagatcggata
gaggggaaattccggaacggatttgaaggcgcggccccgatcctgcaaaaaaggtatgaa
acacaaatcgaattgtatacaaaagcgattgaacaaattacaaaaacgaaagtgaaaggg
cgtgcgctctatttcttcgatggaggtcacgttcttacactgtaa
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integrated database retrieval system
