Bacillus siamensis: CWD84_19565
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Entry
CWD84_19565 CDS
T06647
Symbol
cshA
Name
(GenBank) ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsia
Bacillus siamensis
Pathway
bsia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWD84_19565 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsia03019
]
CWD84_19565 (cshA)
03009 Ribosome biogenesis [BR:
bsia03009
]
CWD84_19565 (cshA)
Enzymes [BR:
bsia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWD84_19565 (cshA)
Messenger RNA biogenesis [BR:
bsia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWD84_19565 (cshA)
Ribosome biogenesis [BR:
bsia03009
]
Prokaryotic type
rRNA helicases
CWD84_19565 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AUJ78838
UniProt:
A0AAI8N1R8
LinkDB
All DBs
Position
complement(3798255..3799793)
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AA seq
512 aa
AA seq
DB search
MVNHDITETAIRRSLNNLTITFQDFQLSSDLMKSINRMGFEEATPIQAQTIPLGLLNKDV
IGQAQTGTGKTAAFGIPLVEKMNPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVL
PIYGGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFI
DDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEV
QERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVA
LRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMT
FITPREKSMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVTVDRLRTAISENNLNFYMTAA
AELLEDHDAVTVVAAAIKMATKEPDSTPVRLTDEAPMVSKRYKNQRTSKRRDGQGGGYRG
GKGKNNSRSSYDKKRSTDRRSSSSDRRQKKSY
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaatcacgacattactgaaacagcaatcagaaggagtttgaataatttgactata
acgtttcaagatttccaattaagttctgatctcatgaagtcaatcaatcgtatgggattt
gaagaagcaacaccaattcaggcacaaacgattccgctcggacttttaaataaagatgtc
atcggacaagcgcaaacaggtacaggtaaaacagctgcgttcggtataccccttgttgaa
aaaatgaaccccgagtctcctaatattcaagcaatcgtaatcgcgccaacccgtgaatta
gccattcaagtatctgaagagttatataaaatcggacaagataagcgtgcgaaagtgctg
cctatttacggcggccaggatatcgggcgtcaaatccgcgcattgaagaaaaacccgcat
atcatcgtaggtacgccgggacgtcttcttgaccatatcaaccgccgcacgatccgtctt
aacaacgtgaatacggttgtcatggatgaggccgacgaaatgctgaacatgggattcatt
gatgatatcgaatcaattctctcaaacgtgccgagcgagcaccaaacgcttctattctca
gcaacaatgcctgcgccgatcaaacggatcgcagagcgtttcatgactgagccggagcat
gtaaaagtaaaagcgaaagaaatgactgtttccaacattcagcagttctacttggaagtg
caagagcgtaaaaagttcgacacgctgactcgtcttcttgacattcagtctccggaactt
gcgatcgtattcggacgtacaaaacgccgtgtcgatgagctggctgaagccctgaacctg
cgcggatatgcagctgaaggaattcacggcgacttaacgcaggcgaaacgtatggttgcg
cttcgtaaatttaaagaaggtgcaatcgaagtgcttgtagcgactgacgttgcagcccgc
ggacttgatatctcaggcgtaacacacgtgtacaactttgacgtgcctcaagatcctgaa
agctacgttcaccgtatcggaagaacgggccgtgcaggaaaaacgggtatggcgatgacg
tttatcacaccgcgtgagaaaagcatgcttcgcgcgattgaacaaacgacaaaacgcaaa
atggaccgcatgaaagagccgacgcttgacgaagcattagaaggtcagcagcaggtgacg
gttgaccgtctgcgcacggcgatcagcgaaaacaacctgaacttctacatgacggcagct
gcggaattgttagaagatcatgatgcagtgacagttgtggctgcagccatcaaaatggcg
acaaaagagccggacagcacgcctgtacgcctcactgatgaagcgccgatggtcagcaaa
cgctataaaaaccagcgtacttctaagcgcagagacggccaaggcggcggctaccgcggc
ggcaaagggaaaaacaacagccgttcttcctacgataaaaaacgttcaactgaccgccgt
tcatcttcaagtgacagacgccagaaaaaatcatactaa
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