Bacillus siamensis: CWD84_21290
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Entry
CWD84_21290 CDS
T06647
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bsia
Bacillus siamensis
Pathway
bsia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CWD84_21290 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsia03021
]
CWD84_21290 (rpoB)
03400 DNA repair and recombination proteins [BR:
bsia03400
]
CWD84_21290 (rpoB)
Enzymes [BR:
bsia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CWD84_21290 (rpoB)
Transcription machinery [BR:
bsia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CWD84_21290 (rpoB)
DNA repair and recombination proteins [BR:
bsia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CWD84_21290 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AUJ79142
UniProt:
A0AAI8HS48
LinkDB
All DBs
Position
complement(4143432..4147013)
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGDPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVMLQSIKIYAPTDAEGEQT
INVIGNAYIEEAIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRF
GFIETPYRRVDPETGKVTPRIDYLTADEEDNYVVAQANAKLSDDGSFLDDSIVARFRGEN
TVVARNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPIVGT
GMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEIDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVNDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSGDEEEIEMRDLEDEEDAKQADGLALSGDEAPEETASPDVERDAVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgctcgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcaccaattgaggatttcactggt
aacctctctcttgagttcattgactacagtttaggagatcctaagtatcccgttgaagag
tcaaaagaacgtgatgtgacttactcagctccgctgagagtgaaggttcgtttaattaac
aaagaaactggagaggtaaaagaccaggatgtcttcatgggtgatttccctattatgaca
gataccggtacttttatcatcaacggtgcagaacgtgttatcgtatctcagcttgttcgg
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttaccgcg
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaagatgttgtg
tatgtccgcattgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcggttccgatcaagagattctcgatctcattggtgagaacgaatatctccgcaataca
ctggataaggacaacactgaaaacagtgacaaagcgcttcttgaaatctatgagcgcctt
cgtccgggagagccgcctacagtagaaaacgcaaaaagtttgctggattcccgtttcttt
gatcctaagcgatacgaccttgcgaatgtaggacgctataaaattaataaaaagcttcat
atcaagaaccgtctgtttaaccagcgccttgcagaaacactggtggatcctgaaacaggt
gaaatcctcgctgaaaaagggcagattcttgacagaagaacacttgataaagtactgcca
tacttagaaaatggaatcggcttcagaaaactttatcctaacggcggcgttgtcgaggat
gaagtgatgcttcaatccattaaaatctatgctcctactgatgcagaaggagagcagacg
atcaatgtgatcggcaatgcttacattgaagaggcgattaaaaacattacgcctgctgat
attatttcttctatcagctacttcttcaacctcttgcacggagtgggcgacactgatgat
atcgaccatctcggaaaccgacgcctgcgttctgtaggtgagctcctgcaaaaccaattc
cgtatcggtttaagccggatggaacgtgtcgtacgtgaaagaatgtctattcaagacaca
aatacaatcacgccgcagcagctgattaacatcagacctgttattgcgtctattaaagag
ttcttcggaagctcacagctttctcaattcatggatcagacgaacccgcttgctgaattg
acgcacaaacgccgtctgtcagctcttggaccgggcggtttgacgcgtgagcgtgcaggt
atggaagtacgtgacgttcactactctcactacggccgtatgtgtccgattgaaacgcct
gagggcccgaacatcggtttgattaactcattgtcatcatttgcgaaagtaaaccgcttt
ggtttcattgagacgccataccgccgcgttgatcctgaaacaggaaaagtaacgcctaga
atcgactacttgactgctgatgaagaggataactatgtcgtagcccaagcgaacgctaag
ctgagcgatgacggttctttcttggatgacagcatcgtagcccgtttcagaggggaaaac
accgttgtagcccgcaaccgcgtggattacatggacgtatctcctaagcaggttgtatct
gctgcgacagcatgtattccgttcttggaaaacgatgactcgaaccgcgccctcatggga
gcgaacatgcagcgtcaggctgtgcctttgatgcagccggaagctccgatcgtcggaacg
ggtatggaatacgtatccggtaaagactccggtgcagccgttatttgtaaacaccctggt
atcgttgaacgggtggaagcgaaaaacgtatgggtgcgccgctatgaagaaattgacggc
caaaaagtaaaaggcaacctggataagtacagcttgctgaaatttgtccgctccaaccaa
ggtacgtgctacaatcagcgtccgatcgtcagtgtcggcgatgaagtagtaaaaggagaa
atccttgctgacggcccttcaatggagcttggtgaacttgctctcggccgcaacgtaatg
gtcggcttcatgacatgggatggttacaactatgaggatgccatcatcatgagtgaacgc
cttgtgaaagatgatgtatacacatctattcacattgaagaatatgaatcagaagcacgt
gatacaaagcttggaccggaagagatcacccgcgatattccaaacgtaggggaagacgcg
cttcgcaaccttgatgaccgcggaattatccgtatcggcgcggaagtcaacgacggagac
cttctcgtaggtaaagtaacgcctaaaggtgtaactgagcttacggctgaagaacgcctt
ctgcatgcgatctttggagaaaaagcgcgtgaagtccgtgatacttctctccgtgtgcct
catggcggcggcggaattatccacgacgtaaaagtcttcaaccgtgaagacggagacgaa
cttcctccgggagtgaaccagcttgtacgcgtatatatcgttcagaaacgtaagatttct
gaaggtgataaaatggccggacgtcacggaaacaaaggggttatctcgaagattcttcct
gaagaagatatgccttaccttcctgacggcacgccaatcgatatcatgcttaacccgctg
ggtgtaccatcacgtatgaatatcggtcaggtattagaacttcacatgggtatggctgcc
cgctacctcggcattcacatcgcgtcacctgtatttgacggcgcgcgtgaagaagatgtg
tgggaaacacttgaagaagcaggcatgtcaagagacgctaaaacagtgctttatgacggc
cgtacgggagaaccgttcgacaaccgtgtatctgtcggaatcatgtacatgatcaaactg
gcacacatggttgatgataaacttcatgcccgttctacaggtccttactcacttgttacg
cagcagcctctcggcggtaaagcccaattcggcggacagcgtttcggtgagatggaggtt
tgggcgcttgaagcttacggcgcagcttacacgcttcaagaaatcctgactgtgaagtcc
gatgacgtggtcggacgtgtgaaaacatatgaagccatcgtcaaaggcgacaatgttcca
gagcctggtgttccggaatcattcaaagtattgatcaaagagcttcaaagcttaggtatg
gacgtgaaaatcctttcaggcgatgaagaagaaatagaaatgagagatctagaagacgag
gaagatgcgaaacaagctgacggccttgcattatcaggtgatgaagcgccggaagaaaca
gcatctccagacgttgaacgtgacgcagtaacgaaagaatag
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integrated database retrieval system
