Borreliella sinica: QIA41_01750
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Entry
QIA41_01750 CDS
T09575
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bsin
Borreliella sinica
Pathway
bsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QIA41_01750 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsin03019
]
QIA41_01750 (rny)
Messenger RNA biogenesis [BR:
bsin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QIA41_01750 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_2
HDOD
DUF5957
DUF4407
Motif
Other DBs
NCBI-ProteinID:
WPM05825
LinkDB
All DBs
Position
complement(392644..394176)
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AA seq
510 aa
AA seq
DB search
MIYIIFSSIFAGFILGFLLRVFLGRLSLLDLEKNLKKVRVESQLEIENERRQVIANAKSQ
MLKEKNQQDRDIRDRKNEIVNLEKRLLQREETLDKRISALDKQQSRVDFKIKEFEQKEKV
IREKEADLVKRLENISGLTREDARKIVIEKVEHESRRDAQVIINKSEQEAQLLADKVAKD
ILVSTMQRIVTEVSSEFTVASVELPNDEMKGRIIGKEGRNIRALETLIGADIIIDDTPEA
VVISCFDPIRKELAKRTLERLVTDGRIHPARIEEVVYNVTNEINSIIQEEGEKVVFDLNI
HGLDKRLIRGLGRLYFRSSYGQNVLSHSKETAIIGEILAKEMKLDPIIVKRACLLHDIGK
GMESISENSEGHAITGAELAQSCGESEIVVNAIAAHHNEVKPESLEAIVVQIADAISASR
PGARRESLNNYINRLKRLEDIAYSFEGVQKCYAIQAGREVRIIVDNVLVNDEKSILLARD
IAKKIETEMRYPGKIKVTIIRETRVIEYAR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgatatatattattttttcttctatttttgctggctttatattaggatttttattaaga
gtttttttaggtagattgtctttattagatttagaaaaaaatctgaaaaaagtaagagta
gaatcacaattagagatagagaatgaaagaaggcaagttattgctaatgcaaaatctcaa
atgcttaaagaaaaaaaccagcaagatagggatataagagatcgaaaaaatgagattgtt
aatctagagaaaagattattacaaagagaagagactttagataagagaatatctgctctt
gataaacagcagtctagagttgattttaaaattaaagaatttgaacaaaaagaaaaagta
ataagagaaaaagaagccgatcttgttaaaaggttagagaatatttctggtcttacaaga
gaagatgcaaggaaaattgtaattgaaaaagttgagcatgagtctagaagggatgctcaa
gttattatcaataaaagcgaacaggaagcgcaattattagcagataaagttgcaaaagat
attctagtatctactatgcagcgtattgttacagaagtaagttcggagtttacagtagct
tctgttgaattacctaatgatgagatgaaaggaagaattataggtaaagaggggcgcaat
attagggctctcgagactttaataggagccgatattattattgatgatactcctgaagct
gttgttatctcttgctttgatccaataagaaaagagcttgccaagaggactttagaaaga
cttgttacagatggcagaattcatcctgctaggatcgaagaagttgtatataatgttacc
aatgaaataaatagcattattcaagaagagggtgaaaaagtagtttttgatcttaatata
catgggcttgataagagacttattagagggttgggaaggctttattttagaagtagttat
ggtcaaaatgttttaagtcattctaaggaaacggctataataggagaaattttagctaag
gagatgaaattagatcctattatagtaaaaagagcgtgtcttttgcatgatattggaaaa
ggaatggaaagtatttctgagaatagcgaaggacatgctattactggcgctgagcttgct
caaagttgcggagagagcgaaattgttgtcaatgctattgctgctcatcataatgaagtg
aagcccgagagccttgaggctattgttgttcaaatagcagatgccatctcggcatctcgt
cctggagcaaggcgagaaagtttaaataactatattaatagactcaaaagacttgaagac
attgcctatagttttgaaggtgttcaaaaatgttacgcgattcaagctggtcgcgaagtt
aggattattgttgacaatgttttggttaatgatgaaaagtcaattttacttgcaagagat
attgctaagaagatagaaactgaaatgagatatcctggaaaaattaaagttacaattatt
cgtgaaaccagagttattgaatatgcaagatag
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