Peribacillus simplex: UP17_01345
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Entry
UP17_01345 CDS
T04304
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsj
Peribacillus simplex
Pathway
bsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UP17_01345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsj03019
]
UP17_01345
03009 Ribosome biogenesis [BR:
bsj03009
]
UP17_01345
Enzymes [BR:
bsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UP17_01345
Messenger RNA biogenesis [BR:
bsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UP17_01345
Ribosome biogenesis [BR:
bsj03009
]
Prokaryotic type
rRNA helicases
UP17_01345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AMM91413
UniProt:
A0AAW7I5Q9
LinkDB
All DBs
Position
265992..267491
Genome browser
AA seq
499 aa
AA seq
DB search
MTLFSELGLDRTSMKSIEKMGFEEASPIQSQTIPLALEGKDIIGQAQTGTGKTAAFGIPL
MENIDINNENVQGIVIAPTRELAIQVSEELFKLGYGKRARVLAVYGGQDIDRQIRALKKK
PHIIVGTPGRLLDHIKRKNIKLGGVHTVVLDEADEMLNMGFIEDIELILSTVPDERQTLL
FSATMPDPIRKIAERFMQEPVLVRVKAKEMTVDRIEQYYLELKESEKFDTLARLFDIQTP
DLAIVFGRTKRRVDELASALNIRGYMAEGIHGDLSQAKRLSVLKKFKEGSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKHGIAITFVTPRERGQLHAVEHTTK
KRMEKLKTPTLTEALEGQQKAVTEKILTTIENDDLSLYLGQAEELLQKHSAADLVAAMLK
SMTKEPDQTPIKLTEESPSPMRRNRGGSSSSSNRQRNGRSSSGRKDYGSGSSKRPSTNRK
SNGYGNRSTSQKREKSNKI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttgacattgtttagcgaattaggattagatagaacgtctatgaaatcaatagaaaaaatg
ggatttgaggaagcgagcccgattcaatcccaaacgatacctctagctcttgaaggtaaa
gacatcattggtcaagcgcaaactggaactggtaaaactgctgcattcggtatcccattg
atggaaaacatcgatattaataacgaaaatgtgcaagggattgttattgcacctacacgt
gagcttgccatccaagtttccgaagaacttttcaagcttggttacggaaaacgcgcccgt
gtattagcggtttatggtggacaagatatcgatcgccaaatccgtgctttaaagaaaaaa
ccacatattatcgttggtacacctggtcgtcttttagatcatatcaaacgtaaaaatatt
aaattaggcggagttcacactgtagttcttgatgaagcagatgaaatgcttaacatggga
ttcattgaggatatcgaattgatcctttcaacggttcctgacgaaaggcaaacattgctt
ttctcagctacaatgcctgatccaatccgtaaaattgctgaaagattcatgcaagaacca
gttcttgtacgcgtaaaagcgaaagaaatgacagtggatcgcatcgaacaatattacttg
gagttaaaagaaagtgaaaaattcgatacacttgcacgccttttcgatattcaaacaccg
gatcttgctatcgtcttcggacgtacgaaacgccgtgtagatgaattggcttctgcattg
aatatccgcggttatatggctgaaggcattcatggtgacctaagccaggcgaaacgtctg
tccgttttgaaaaaattcaaagaaggaagcatcgatgtccttgttgctactgatgtggct
gcacgtggacttgatatttccggcgtaactcacgtatacaactttgatatccctcaagat
ccagaaagctacgttcaccgtattggacgtacaggacgtgcgggtaaacacggtattgca
attacgtttgtaacaccacgggaaagaggtcaactgcatgcagttgaacatacaacgaaa
aaacgtatggagaaacttaagacccctacgttaactgaagcgttggaaggtcaacaaaaa
gcagtaacggaaaaaattctgactacaatcgagaatgatgatttatcattataccttggt
caagcggaagagttattacaaaaacatagtgcggcggatttagttgcagctatgcttaaa
tcaatgacaaaagaaccggatcaaacgccaatcaagttaacggaagagtctccatctcca
atgcgccgcaatcgtggaggaagcagttcttctagtaacagacagcgcaatggccgcagt
tcttcaggcagaaaagattacggtagcggatcaagtaaacgcccaagcacgaaccgtaaa
tcgaatggttacggaaaccgtagcacgagccaaaaaagagaaaaatcaaataaaatttaa
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