Peribacillus simplex: UP17_08025
Help
Entry
UP17_08025 CDS
T04304
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bsj
Peribacillus simplex
Pathway
bsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UP17_08025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsj03019
]
UP17_08025
03016 Transfer RNA biogenesis [BR:
bsj03016
]
UP17_08025
Enzymes [BR:
bsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UP17_08025
Messenger RNA biogenesis [BR:
bsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UP17_08025
Transfer RNA biogenesis [BR:
bsj03016
]
Prokaryotic type
tRNA degradation factors
UP17_08025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
KH_N4BP1_2nd
Motif
Other DBs
NCBI-ProteinID:
AMM92503
UniProt:
A0AAW7IH00
LinkDB
All DBs
Position
1690529..1692646
Genome browser
AA seq
705 aa
AA seq
DB search
MGQEKHTYSFDWAGRNVTVEIGQLAKQANGAVLVRYGETAVLSTATASKEPRNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSERAILASRLIDRPIRPLFADGFRNDVQIISMVMSV
DQDCSSEMAAMLGSSLALSVSDIPFEGPIAGVVVGRINNEFMINPTVDQLAKSDINLTVA
GTKDAINMVEAGANEVPEETMLEAIMFGHDEIKKIIAFQEKIVAEIGKEKMQIALYQVDA
ELEAEVKGLCEADLNKAVQVQEKHAREDAIKEVKDRVLAHYEEETDEAKLKQIKEILNKL
VKSEVRRLITEEKVRPDGRNPDEIRPLSSEVTILPRTHGSGLFTRGQTQALSICTLGALG
DVQILDGLGTEESKRFMHHYNFPHFSVGETGPIRGAGRREIGHGALGERALEPVIPNDKD
FPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPLKAPVAGIAMGLVKTGEHYTILTD
IQGMEDHLGDMDFKVAGTSKGVTALQMDIKIEGLSREILEEALLQAKHGRMHILESMMST
INQPREQLSKYAPKIVTMSINPDKIRDVIGPSGKHINKIIEETGVKIDIEQDGTVFISST
DEPMIQKAKKIIEDIVREVVVGELYLGKVKRIEKFGAFVEIFNGKDGLVHISELAEERVG
KVEDVVSLGDELLVKVTEIDKQGRVNLSRKAVLKEQKEAANPSQS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggacaggaaaaacatacgtattcatttgactgggccggccgtaatgtaacggtagag
atagggcaattggccaaacaagcgaacggagcagttttagtccgttatggagaaactgct
gtattaagtacagcaacagcttcgaaagagcctagaaatgtcgacttcttccctttgaca
gtcaactacgaagaaagactttatgcagtcggcaaaattccaggtggcttcatcaaacgt
gaaggccgaccaagtgaaagggcaattcttgcaagccgtttaattgatcgtccaatccgc
ccgctatttgctgatggcttcaggaacgatgttcagatcatcagcatggtcatgagtgtc
gatcaagattgctcttctgaaatggcagcgatgcttggatcatcccttgcactttcagtt
tccgatattccattcgaagggccaattgctggagttgtagtaggaagaatcaataatgaa
ttcatgattaaccctactgttgaccaacttgcaaaaagtgacatcaatttgacggttgcc
ggtactaaagatgctatcaacatggttgaagccggagctaatgaagtaccagaggaaacc
atgcttgaagcaatcatgtttggacatgatgaaatcaagaaaatcattgcattccaagag
aaaatcgttgctgaaatcggcaaggaaaaaatgcagatcgctttatatcaggtggatgca
gagctggaagcagaagtgaaaggcctatgtgaagccgacttgaacaaagctgtacaagtt
caggaaaaacatgctcgtgaagacgcgattaaagaagtgaaagatcgtgtattggctcat
tatgaagaagaaactgatgaagctaaattaaaacaaatcaaagaaatcctgaataaattg
gtcaaatctgaagtacgccgtttaattacggaagaaaaagtgcgtccggatggccgtaat
cctgacgaaatcagaccattatcatcagaagttaccattctgccccgtacacatggttct
ggattgttcacacgcggacaaacccaagcactatccatctgtactttaggtgcacttggt
gatgtgcagattcttgatggccttggaaccgaagagtcaaaacgtttcatgcaccactat
aacttcccacatttcagtgttggtgaaactggtcctatccgtggagcaggtcgccgtgaa
attggtcatggtgcacttggtgaaagagcattggaacctgtcattccaaacgataaagac
ttcccttatacaatcagacttgtttcagaagtgcttgaatcaaacggttcaacttcacaa
gcaagtatctgtgcaagcactttggcaatgatggatgctggtgttccattgaaggctcca
gttgccggtattgcaatgggccttgtcaaaactggtgagcactatacaatcttaaccgat
attcaaggtatggaagatcatcttggagatatggactttaaagtcgcaggtacctcaaaa
ggtgttactgccctacaaatggacattaagattgaaggtctatcaagagagatccttgaa
gaagctttacttcaagccaaacacggccggatgcatattttggaatcaatgatgtcaaca
atcaatcaaccgcgtgagcagttatccaaatatgctcctaaaatcgttacaatgtctata
aatccggataaaatccgtgatgtaattggaccgagcggaaaacatatcaataaaatcatt
gaagaaactggcgtgaaaatcgacatcgagcaagatggaacggtattcatatcttctaca
gatgaaccaatgattcaaaaagcgaagaaaatcattgaggatatcgtacgtgaagtcgta
gtcggcgaactatacttaggtaaagttaaacgtattgaaaagttcggtgctttcgttgaa
atcttcaatggtaaagacggtttggtgcatatttccgaactggctgaagaaagagtcgga
aaagtggaagatgtcgtttcacttggcgatgagttattggttaaagttactgagattgat
aagcaaggaagggtaaacctttcccgtaaagcggtcctgaaagagcaaaaagaggcagct
aacccttctcaatcgtaa
DBGET
integrated database retrieval system
