Peribacillus simplex: UP17_13590
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Entry
UP17_13590 CDS
T04304
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsj
Peribacillus simplex
Pathway
bsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UP17_13590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsj03019
]
UP17_13590
03400 DNA repair and recombination proteins [BR:
bsj03400
]
UP17_13590
Enzymes [BR:
bsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UP17_13590
Messenger RNA biogenesis [BR:
bsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UP17_13590
DNA repair and recombination proteins [BR:
bsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UP17_13590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AMM95536
LinkDB
All DBs
Position
complement(2939322..2941442)
Genome browser
AA seq
706 aa
AA seq
DB search
MEKAREYLQEYFGYESFRKGQEQIIEQVLGGINTAGIMPTGGGKSICYQIPALLLPGVTL
VISPLISLMKDQVDALEQNGIDATFLNSSISGLESSNRMNDIKQGRYKLVYVAPERLENA
AFQQDLFNVDISLVAIDEAHCISQWGHDFRPSYLKIKTLLKNMPSAPAVLALTATATPHV
TDDICQSLGISGQHTISTGFSRDNLFFSVVKEENRGRFLMRYIEKNKNESGIIYAATRKE
VDSLHAKLNKAGFKTGRYHAGMNEQDRSEQQDQFIRDDVPLMVATSAFGMGIDKSNVRYV
IHYQTPKNMESYYQEAGRAGRDGLESECILLYSPQDMQIQRFLIDQSNPSQEWQSQELKK
LNKMKDYCFTEGCLQAFILQYFGEENPEDCGHCENCTDKRDSIEVTTQAQMVLSCMLRMG
ERFGKTMISQVLTGSRNKKIEEFGFQKLSTYGIINNQSAKDVGDFIDFLTAKQYIEMTGG
QFPVLKVTNAGREVLLGQKKVLRKEIKKVSSISVDHGLFNELRQLRKELAGKENVPPFII
FSDASLKDMAVKLPKTEQEFLEVKGVGTQKFERFGTVFLEGISHYVQAHPELETNIMVTK
EAVKRSTTPSHLESYRLYQEGKSIKEIGTMRGLSSISIENHLLKCAEEHLDIKWEGIFSD
KEYDLVLETAKQLDSEKLKPLKEALPEHFSYFMIKAILVKAGLENA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcacgtgaatatttacaggaatattttggttatgagtcattccgaaaaggt
caggaacagattatcgaacaggtgttgggaggaataaacacagcgggaatcatgcctact
ggcggaggtaaatcaatatgttaccaaatcccggccctcttgttacctggtgtaacactc
gtgatatccccacttatttccttgatgaaggaccaagtagatgccctcgaacaaaacggg
attgatgccacatttcttaatagctccatttcggggttagaatcatccaatagaatgaac
gatattaagcaaggaagatataagttggtttatgtggcaccggaacgtttggaaaatgct
gcatttcaacaggatttatttaatgtggacatttcattggtggccattgatgaagcccat
tgcatatctcaatggggccatgacttcagaccaagctatttaaaaatcaagaccttattg
aaaaacatgccatcagctcctgctgtactggcattaacggcaacagccacaccgcatgta
accgatgatatttgtcagtcgctcggaatatcagggcagcatacaatatcaacgggattt
tcaagagataacttgttcttttccgttgtgaaagaagaaaaccgcggacgttttttaatg
cgctatatagagaaaaacaagaatgagtcgggtatcatatatgcagccactaggaaagaa
gtcgattcgttgcatgccaagcttaataaagccggattcaagacaggtcgataccacgct
ggcatgaatgaacaagaccgttcggaacagcaagaccaattcattcgtgatgacgttcct
ttaatggtagcgacatctgcatttgggatgggaatcgataagtctaatgtcagatacgtc
atccattaccaaactccaaagaacatggagagttattatcaggaagcaggtcgtgcagga
agggatggtttggagagtgaatgcatccttttgtattccccccaggatatgcagattcag
cgttttctgattgatcaatcaaacccttcccaggagtggcaatcacaggaattgaagaag
ttgaacaaaatgaaggattattgttttactgaagggtgtttgcaagccttcattcttcaa
tactttggagaggaaaatcctgaggattgcggtcattgtgaaaattgtacagataaacgt
gactctattgaagtaactacacaggcacagatggtcctttcatgcatgttgcgaatgggt
gagcgattcggtaaaacgatgatctcccaagtgcttacgggatcacgaaataagaaaatt
gaagagttcggctttcagaagctttcaacctatggaatcatcaataatcaatctgcaaag
gatgtaggcgatttcattgatttccttacagcgaaacagtatatcgaaatgaccgggggc
caatttccagtccttaaagtgaccaatgctggcagggaagtgctgttgggacagaaaaag
gtcctgcgtaaagaaataaaaaaagtaagcagcatcagtgtagatcatgggttattcaat
gagttgagacagttaagaaaagaattggcaggtaaggaaaatgtacctccattcattatt
ttttccgatgcatctttgaaagatatggccgtcaaactgccgaaaacagaacaggaattc
ctagaagtaaaaggggtgggcacccagaagttcgaacgcttcggcaccgtgttcctagaa
ggaatttcccattatgtacaggcacatcctgaattagaaacgaatataatggttacaaag
gaagcagtaaagagaagcactacgccatcacatttagaaagctatcgcttatatcaggaa
ggcaaatcaatcaaggaaatcgggacaatgagaggtctgtcttccatttcaattgaaaat
catttattaaagtgtgcagaggaacatttggatatcaaatgggaagggattttctcggat
aaagagtatgaccttgtattggaaactgcgaaacaattggattctgaaaaactaaaaccg
ctaaaagaagccttacctgagcacttttcctactttatgattaaagcgatcttggttaaa
gcaggattggaaaacgcatag
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