Peribacillus simplex: UP17_24640
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Entry
UP17_24640 CDS
T04304
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsj
Peribacillus simplex
Pathway
bsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UP17_24640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsj03019
]
UP17_24640
03009 Ribosome biogenesis [BR:
bsj03009
]
UP17_24640
Enzymes [BR:
bsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UP17_24640
Messenger RNA biogenesis [BR:
bsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UP17_24640
Ribosome biogenesis [BR:
bsj03009
]
Prokaryotic type
rRNA helicases
UP17_24640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
AMM95245
LinkDB
All DBs
Position
complement(5252213..5253910)
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AA seq
565 aa
AA seq
DB search
MTKFIDLGVSPAINMILKQIGISNPTPIQEKSIPDILAGRDVIAKAQTGTGKTLAFLLPI
LEKVDPAASHIQSLIVTPTRELALQITAELKKFANEIEGLQVLAVYGGQDVEQQMKKLTR
NISVVVATPGRLLDHLRRGTIDLSQTQTLVLDEADQMLHIGFLPEVEEIMGQLPEERQTL
LFSATMPEQVHQLAKRYMNKPLTAAVKAEQVTVEQIRQLVIETTDRAKQSSLINIIKEEQ
PYLAIIFCRTKRRVSVLNDALKAAGFNSEELHGDLSQAKRERVMKNFRDAKLQYLVATDV
AARGLDVEGVTHVFNYDVPEDAESYIHRIGRTGRAGENGLAVTFIATKDLQLLSDIEKGI
SMKIERKTIEGVKMFQPDEVGQKKKRYDDNAEVGTRRPHSGGGRRHRERIDTRGPNRGSH
RSVNQADNREIEREKPRGARMENSRGPKREDSRGGRMENSRGPKREDSRGGRMENSRGPK
REDSRGGRMENSRGPKREDSRGGRMENSRGPKREDSRGGRSEDSRGLKRDNPRGDQRDSR
RANSAQGPSNLRGGSGSSPNRGRNR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattcatcgaccttggcgtcagcccggcgattaacatgatattaaagcaaata
ggaatatccaaccccacccccatacaggagaaatcgataccggatatccttgctggaaga
gatgtcatcgcgaaggcgcagacgggaacggggaagaccttggcgtttttgctgccaatc
ctggaaaaagtcgatcctgctgcatcccacatacaatctctgatcgtcacgccaaccaga
gaattggctttgcaaatcacagccgaattgaaaaaattcgccaatgaaatcgaaggactt
caggtgcttgcagtttatggcggacaggatgtcgagcagcaaatgaaaaagctgacaaga
aatatttctgtggtggttgccacaccaggcaggttattagatcatttaagaaggggcacc
attgacctttcccaaactcaaacacttgtgctggatgaagctgatcaaatgctccatatt
ggatttttaccagaagtggaagaaatcatgggtcagcttccagaggagcgccaaacgttg
ctcttttcagcgacgatgccagaacaagtgcatcaattggctaagcgctacatgaataaa
ccattaaccgccgctgtgaaggctgagcaagtaacggtcgagcaaatcagacagcttgtc
atcgaaacgaccgatcgtgccaaacagtcttcattaattaacataattaaagaagaacag
ccatacctggcgatcatattttgccgtacaaaacgtcgcgtttcagttttgaatgatgcc
ctcaaggcagccggattcaattctgaagaactccatggggacctttcacaggcaaagcgg
gaacgcgtcatgaaaaacttcagggatgccaagcttcaatatttagtggcaacggacgtt
gctgcacgaggacttgatgtagaaggtgtgacacatgtattcaattatgatgttcccgag
gacgctgaaagttacatccatcgaattggccgtacaggacgagcgggtgagaatggcttg
gctgtaaccttcattgccacgaaggatcttcagcttttaagcgatatagaaaaagggatc
tccatgaaaatcgaaagaaagacgattgaaggagtgaaaatgttccaacctgatgaggtg
ggacaaaaaaagaaacgttatgatgataatgctgaagtgggtacccgccgaccgcattca
ggagggggaaggcgccatcgggaacggatagatacgagaggaccgaatcgaggcagtcac
cgttctgtaaatcaagcggacaatcgtgaaatcgagagggagaaaccacggggagcccgg
atggaaaacagccgcggacctaaacgtgaggattcacggggaggccggatggaaaacagc
cgcggacctaaacgtgaggattcacggggaggccggatggaaaacagccgcggacctaaa
cgtgaggattcgcggggaggccggatggaaaacagccgcggacccaaacgtgaggattcg
cggggaggccggatggaaaacagccgcggacccaaacgtgaagattcacggggaggccga
tcggaagacagccgtggactaaagcgtgacaatccacgaggagatcaaagagacagccgt
agagcaaacagtgcacaagggccaagtaatcttaggggtgggtcaggcagcagccccaat
agagggagaaaccggtaa
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