Brucella canis HSK A52141: BCA52141_I0048
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Entry
BCA52141_I0048 CDS
T01705
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bsk
Brucella canis HSK A52141
Pathway
bsk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCA52141_I0048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsk03019
]
BCA52141_I0048
Enzymes [BR:
bsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCA52141_I0048
Messenger RNA biogenesis [BR:
bsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCA52141_I0048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AEW13070
LinkDB
All DBs
Position
1:complement(32371..33759)
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AA seq
462 aa
AA seq
DB search
MPLKEIELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQT
GSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTAL
VLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFIN
DVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGTTASEITQVVHPVP
TKEKRRLLSAMLTDADMRSVIVFTRTKHGADAVVRHLERDRYDVAAIHGNKSQNARQRAL
NGFRDGTLRILVATDIAARGIDVPGISHVVNYDLPDEPETYVHRIGRTGRNGASGASITL
YDPATEESKLRAVERVTRSKLSIKDAPVKLAPAPVAKGPAPQGQRTEQAESRKAPAHKHR
RPAQKAGEQHRAGAHASAGEAAPKPKRPFRRKRRSNGGQRAA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctgaaagagattgaattgacaaaagaaaacacgggcggcttcgccgctctcggt
atcaccggcgttctgctcaaaggcgtggaagctgccggcatgaccgagccgaaaccgatc
cagacgcaagccatcccgtcgcaacttgaaggccaggacatcctcggcatcgcccagacg
ggttccggcaagacggcggctttcagcctgcccatccttcagaaaatcatcggccttggc
gacaagcgccgcccgaaaaccgcacgcgcgctgatcctggcgccaacgcgtgaactggca
gtacagattgagcagacgatccgcaatgtctccaaaagcgcgcatatctccaccgcgttg
gttctcggcggcgtgtccaagctttcgcagatcaagcgtatcgcacccggcatcgatgtg
ctcatcgcaacacccggccgcctgacggacctgatgcgcgatggcctcgtggacctgtcg
cagacccgctggctggttctcgatgaagccgaccgcatgttggacatgggcttcatcaat
gatgtgaagcgcattgccaaggcaacacacgccgaacgccagaccgcactgttctcggct
accatgccaaaggagatcgcatcgctggccgaacgtctgctgcgcgatccggtacgggtg
gaagtggcgccacaaggcaccacggcttctgaaattacgcaggtcgtgcatccagtgccg
acgaaggagaagcgccgcctgctttcagccatgctgaccgatgccgacatgcgttccgtc
atcgtcttcacgcgcaccaagcacggagcagatgccgtcgtgcgccatcttgagcgcgac
cgctatgatgttgcggccatccacggcaataagtcgcagaatgcacgccagcgcgcgctg
aacggtttccgcgatgggaccctgcgcattctggttgcaacggatattgcagcgcgcggc
atcgacgtgcccggcatcagccatgtggtgaattacgacctgccggacgagccggaaacc
tatgtgcaccgcatcggccgcaccggccgcaacggcgcaagcggcgcttccatcacgctt
tatgatccggctacggaagaatcaaagctgcgggcggttgagcgcgtcacgcggagcaaa
ctttcgatcaaggatgcgccggtgaagcttgcaccagcacctgtcgccaaaggccccgca
ccccagggccagcggactgaacaggctgagagccgcaaggcgcccgcgcacaagcatcgc
cgccccgcacagaaggcgggcgagcagcatcgcgccggggcacatgccagcgccggtgag
gccgcgccgaagccgaagcgtcccttccgccgcaagcgccgcagcaatggcggccagcgc
gccgcctga
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