Bacillus subtilis subsp. subtilis BSP1: A7A1_1597
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Entry
A7A1_1597 CDS
T02384
Name
(GenBank) Hypothetical protein YdbR
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsl
Bacillus subtilis subsp. subtilis BSP1
Pathway
bsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7A1_1597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsl03019
]
A7A1_1597
03009 Ribosome biogenesis [BR:
bsl03009
]
A7A1_1597
Enzymes [BR:
bsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7A1_1597
Messenger RNA biogenesis [BR:
bsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A7A1_1597
Ribosome biogenesis [BR:
bsl03009
]
Prokaryotic type
rRNA helicases
A7A1_1597
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGA22215
LinkDB
All DBs
Position
complement(3528180..3529715)
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AA seq
511 aa
AA seq
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MVNHDITETAIRRSLNNLTITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDV
IGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVL
PIYGGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFI
DDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEV
QERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVA
LRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMT
FITPREKSMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVTVERLRTTISENNLNFYMTAA
AELLEDHDAVTVVAAAIKMATKEPDDTPVRLTDEAPMVSKRYKNQRSSKRRDGQGGGYRG
GKGKSNNRSSYDKKRSNDRRSSGDRRQKKSY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaatcacgacattactgaaacagcaattagaaggagtttgaataatttgactata
acgtttcaagattttaatttaagttctgatctcatgaaagcaattaatcgtatgggattt
gaagaagcaacaccgattcaggcacaaacgataccgctcggactttcaaataaagacgtc
attggacaagcgcaaacaggtacaggtaaaacagctgcgtttggtataccccttgttgaa
aaaattaaccccgagtctcctaatattcaagcaatcgtaatcgcgccaacccgtgaatta
gccattcaagtatctgaagaattgtataaaatcggacaagataaacgtgcgaaggttctt
cctatttacggcggacaggatattggacggcaaatccgggcgttaaagaagaatccgaat
attattgtcggaacacctggacgtcttcttgaccacatcaatcgccgcaccattcgttta
aacaatgttaatactgttgtaatggatgaagcggatgaaatgctgaacatgggattcatt
gatgatattgaatctatcctttcaaacgtgccaagcgagcatcagacacttctgttctct
gccacaatgcctgcgccgatcaaacgcattgcagagcgctttatgactgagccggaacac
gtaaaagtaaaagcgaaagaaatgacggtttctaacattcagcagttctatttggaagtg
caagaacgcaaaaaattcgatacactgactcgccttcttgacattcagtctcctgagctt
gcgatcgtattcggacgtacaaaacgccgtgtcgatgagctggctgaagccctgaacctt
cgcggatatgcagctgaaggtattcacggtgacttaacgcaggcgaaacgtatggttgcg
cttcgtaaatttaaagaaggcgcaatcgaagttctagtcgcaactgatgttgccgctcgc
ggacttgatatctcaggtgttacacacgtatacaacttcgacgtgcctcaagatcctgaa
agctacgttcaccgtatcggaagaacgggccgtgcaggaaaaacaggtatggcgatgacg
ttcattacaccgcgtgagaaaagcatgcttcgcgcaattgaacaaacaacaaaacgcaaa
atggaccgcatgaaggagcctacacttgatgaagcgttagaaggccagcagcaggttact
gttgaacgtcttcgcacgacaatcagtgaaaacaacctgaacttctacatgacagcggca
gctgagctgcttgaagatcatgatgcagtaacagtggttgcggcggctatcaaaatggct
acaaaagagccagacgacacaccggttcgcttaacagacgaagcgccgatggtcagcaaa
cgctacaagaaccagcgctcttctaaacgcagagacggtcaaggcggcggctaccgcggc
ggaaaagggaaaagcaacaaccgttcttcctatgacaaaaagcgttcaaacgatcgccgt
tcttcaggtgacagacgccagaaaaaatcttactaa
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